Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02287 ATGGCGAAAAAGAAAAATAAGGGAAATGGACAAAACAACAATAACAATGGAGCAACCAAGGAAAATGGAGAAAACAACAACAACAATGGAGGAGGAGGAAAAGAAAATGGAGAAAACAACAACAGTAACAATAACAACAACAACAATAACAACACTAACAATAACAACACGGTGTTGAAAGTCTCAATGCATTGTGACGGTTGCGCTTCCAAAATCATCAAACACCTTCGTTCCATCAAAGGTGTGGAGGCGGTGAAAGCAGAGAGTGAGACCGGAAAAGTAACGGTCGTCGGAAAAGTTGACCCTGTGAAAGTGAGAGATAATCTCGCGGAGAAGATAAAGAAGAAAGTGGAACTCATTTCTCCACAGCCAAAGAAAGAGAACAAGAAGGAAACGGAAACAAACAATAAAAACAATTCCGATGAGAAAAAGAAAACCGACGAGAAAAAAACCAATGAGAAAGAGTCGGTTACAACTTCTGTGTTGAAAATGTTGCTGCACTGTCAAGGATGCGTTGATAAAATTGGGAAGATTGTGTTGAAAACTAAAGGAGTGCTTGAAATGGGAGTAGACAAGGAGAAGGATACTGTGACTGTGAAGGGTACAATGGATGTGAAAAAGTTGGTTGAGAATTTGCAAGAGAAGCTTAAGAGGAAAGTTGAGGTTGTACCTCCTAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGAGAAGGAAGGAGGTGGAGGTGGAGGTGGAGGAGGAGGGAAGAAAAAGAACAAGGGTGGTGGAGGTGGTGGTGGTGATGGAGGAGAAGGTGGAGAGAATAAGAATGAAGGGGGAGAAGTTATGAAAATGGAGTATATGATTCAACAACCCTTTGGATATTATGGTTATGGAAATGGAAATGTGGAGGGGTATAATGAACAAGTTTACCTAAATCTGTTACATAATCATATGCATACTCAACCACCACAAATGTTCAGTGATGAGAATCCTAATGCTTGCAATGTCATGTGA 996 0.4066 MAKKKNKGNGQNNNNNGATKENGENNNNNGGGGKENGENNNSNNNNNNNNNTNNNNTVLKVSMHCDGCASKIIKHLRSIKGVEAVKAESETGKVTVVGKVDPVKVRDNLAEKIKKKVELISPQPKKENKKETETNNKNNSDEKKKTDEKKTNEKESVTTSVLKMLLHCQGCVDKIGKIVLKTKGVLEMGVDKEKDTVTVKGTMDVKKLVENLQEKLKRKVEVVPPKKDKEGGGGGEKEGGGGGGGGGGKKKNKGGGGGGGDGGEGGENKNEGGEVMKMEYMIQQPFGYYGYGNGNVEGYNEQVYLNLLHNHMHTQPPQMFSDENPNACNVM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02287 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 32 331 IPR044594 GO:0046872
Vivi5g02287 331 CDD HMA 166 221 IPR006121 GO:0046872
Vivi5g02287 331 Pfam Heavy-metal-associated domain 59 116 IPR006121 GO:0046872
Vivi5g02287 331 Pfam Heavy-metal-associated domain 166 217 IPR006121 GO:0046872
Vivi5g02287 331 MobiDBLite consensus disorder prediction 219 271 - -
Vivi5g02287 331 MobiDBLite consensus disorder prediction 1 58 - -
Vivi5g02287 331 ProSiteProfiles Heavy-metal-associated domain profile. 157 220 IPR006121 GO:0046872
Vivi5g02287 331 Gene3D - 53 128 - -
Vivi5g02287 331 Gene3D - 157 230 - -
Vivi5g02287 331 CDD HMA 58 115 IPR006121 GO:0046872
Vivi5g02287 331 MobiDBLite consensus disorder prediction 219 235 - -
Vivi5g02287 331 SUPERFAMILY HMA, heavy metal-associated domain 57 119 IPR036163 GO:0046872
Vivi5g02287 331 ProSiteProfiles Heavy-metal-associated domain profile. 54 125 IPR006121 GO:0046872
Vivi5g02287 331 MobiDBLite consensus disorder prediction 116 155 - -
Vivi5g02287 331 SUPERFAMILY HMA, heavy metal-associated domain 158 217 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02287 Vivi-Chr5 96354547 96356251 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02287 - - mtr:25492402 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02287 5 96354547 96356251 Vivi5g02287 5 96354547 96356251 ECH