Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02283 ATGTCAGCCACCTCTACTTTACACTTCCTTTCTCGTCTCCGTTTCATCGCCAAACCCCAACGTTTCTCTCTCCCATCACCACTCTCAACCCCTTTCCATTTCTCACTCTTCACCAAACCAAAGAAATCGACTCAGTTTCGATTTTTCTCAATGGCTGCTGCTGAACCGAAGGAATCACCGGCTAACAACCCTGGTCTTCATGCAACTATAGATGAAGCTACTAAGGGTTACTTTATGCAACAAACTATGTATAGAATCAAAGACCCCAAAGTTAGCCTTGATTTTTACTCCCGCATTTTGGGCATGTCTTTGCTCAAGAGACTGGATTTTCCGGAATTGAAATTCAGCTTGTACTTTATGGGGTATGAGGATACATCTGAAGCTCCAAGTAACCCTGTTGATAGAACAGTTTGGACCTTTGCTCAAAAGGCTACAATTGAATTGACACATAATTGGGGCACAGAAAGTGATCCAGAGTTCAAAGGGCACCACAATGGCAATTCGGATCCTCGTGGTTTTGGACACATTGGCATAACTGTTGATGACACCTACAAAGCTTGTGAAAGATTTCAGAATTTGGGAGTTGAGTTTGTTAAGAAACCAGATGATGGGAAAATGAAAGGGATAGCATTTATCAAGGATCCGGATGGATACTGGATTGAAATCTTTGACAGGAAGACAATAGGAAATGTAACAGAAGCTGCTGCTGCTTAA 714 0.4216 MSATSTLHFLSRLRFIAKPQRFSLPSPLSTPFHFSLFTKPKKSTQFRFFSMAAAEPKESPANNPGLHATIDEATKGYFMQQTMYRIKDPKVSLDFYSRILGMSLLKRLDFPELKFSLYFMGYEDTSEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGHHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTEAAAA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02283 237 Gene3D - 53 232 IPR029068 -
Vivi5g02283 237 CDD GlxI_Zn 79 223 - -
Vivi5g02283 237 ProSitePatterns Glyoxalase I signature 1. 81 102 IPR018146 GO:0004462|GO:0046872
Vivi5g02283 237 NCBIfam lactoylglutathione lyase 79 227 IPR004361 GO:0004462|GO:0046872
Vivi5g02283 237 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 37 231 - -
Vivi5g02283 237 ProSitePatterns Glyoxalase I signature 2. 166 182 IPR018146 GO:0004462|GO:0046872
Vivi5g02283 237 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 67 225 IPR029068 -
Vivi5g02283 237 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 78 225 IPR037523 -
Vivi5g02283 237 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 222 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02283 Vivi-Chr5 96196566 96200977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02283 27 236 Calmodulin-binding Proteins AT1G08110 73.488 4.98e-110 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02283 K01759 - gmx:100779383 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02283 5 96196566 96200977 Vivi5g02283 5 96196566 96200977 ECH