Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02257 ATGGGGACTGTGCTTCCAAGCTCAATAGCAAAACATGAAAACATTCAAATTCAACATCCAAAAGATGTTGATGCAGGTGCTCTCTTTGTCCTCAAATCAAAAGGTTCGTGGATGCATTGTGGTTACCACTTAACATCAACAATTGTGGCAGCACCACTTTTAAGTCTTCCTTATGCTTTCACTTTTCTTGGATGGACTCTTGGAATATTTTTCTTAGTAATTGCAGCTATGGTTACTTTTTATTCCTACAATTTACTATCTTTGGTTCTTGAACACCAAGCTAATTTGGGTAATCGTCAGCTTCGATTTCGAGACATGGCTCGCGACATTTTAGGTCCTAAGTGGAGTCATTACTTTGTGGGGCCAATTCAATTAGCAGTATGCTATGGGGTTCTTGTTGCTTGTATTCTTCTTGGTGGTCAATGCATGAAGGCAATTTATGTGTTGTCAAGTCCAAATGGCTCTATGAAGCTTTACAATTTTGTCATCATATTTGGTTGCTTCATGTTAATTTTGGCTCAAATCCCATCTTTTCACTCATTGAGACATATTAATCTTGTCTCATTGGTTCTATGCTTACTCTATAGTGGTTGTGCTGTTGCTGGTTCTATATATATTGGAAACTCATCAAAAGGACCAGAAAAGAATTATTCTCTGAAAGGTGATACCGAAAATCGAGTTTTCGGAATCTTCAATGCTCTTAGCATCATTGTCACTTCCTATGGAAATGGAATCATTCCTGAAACTCAGGCTACAATAGCTCCACCAATTAAAGGAAAGATGTTAAAGGGATTGAGTGTTTGTTTTACCATAGTTATTCTCACTTTCTTTAGCGTTACTATATCTGGATATTGGGCATTTGGAAATGAATCTCAAGGTCTTATCTTAAGCAATTTTGTGGATAATGGGAAGCCGTTGTTACCCAAATGGTTTATTTATATGAGCAATATTTTTACTATAGCACAGTTATCAGCAGTTGCTGCGGTGTACTTGCAACCTACAAATGAAGTATTAGAGCAATCATTTGGAGATCCAAAAAGTCCTGAGTTTTCAAAACGCAATGTTATCCCTCGAGTGATTTCTCGGTCATTAAGTATTATTATCGCAACCATTCTAGCAGCCATGCTTCCATTTTTTGGGGACATAAATTCTCTTATTGGAGCTTTTGGATTTATGCCACTTGACTTCATTTTGCCTGTAATTTTCTATAACTTGACATTTAAGCCATCTAAGAGAAGTCCCATTTTCTGGTTGAATGTAACAATTGCTGTTGTTTTCTCTATATTGGGAGCTATAGCAACAATTGCAGCTGTTAGGCAAATAGCCCTTGATGCCAAAAATTATCAACTATTTGCTAATGTATGA 1365 0.3678 MGTVLPSSIAKHENIQIQHPKDVDAGALFVLKSKGSWMHCGYHLTSTIVAAPLLSLPYAFTFLGWTLGIFFLVIAAMVTFYSYNLLSLVLEHQANLGNRQLRFRDMARDILGPKWSHYFVGPIQLAVCYGVLVACILLGGQCMKAIYVLSSPNGSMKLYNFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLLYSGCAVAGSIYIGNSSKGPEKNYSLKGDTENRVFGIFNALSIIVTSYGNGIIPETQATIAPPIKGKMLKGLSVCFTIVILTFFSVTISGYWAFGNESQGLILSNFVDNGKPLLPKWFIYMSNIFTIAQLSAVAAVYLQPTNEVLEQSFGDPKSPEFSKRNVIPRVISRSLSIIIATILAAMLPFFGDINSLIGAFGFMPLDFILPVIFYNLTFKPSKRSPIFWLNVTIAVVFSILGAIATIAAVRQIALDAKNYQLFANV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02257 454 PANTHER OS05G0424000 PROTEIN-RELATED 36 434 - -
Vivi5g02257 454 Pfam Transmembrane amino acid transporter protein 34 438 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02257 Vivi-Chr5 94771528 94776121 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02257 125 454 Organic Solute Cotransporters AT1G08230 63.855 1.24e-151 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02257 - - gmx:100791114 750.355