Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02255 ATGAGTACTCTTCTTCCAAGTTCAATAGCAGAACATGAAAAATCAGAGAAGCAAAATATATCTATACAAATTCAACAAAAAGATGTTGATGCAGGTGCTCTCTTTGTCCTCAAATCAAAAGGATCATGGGTACACTGTGGTTACCACTTAACAACATCTATTGTGGCAGCACCACTTTTAAGTCTTCCTTATGCATTCACCTTTCTTGGATGGACTGCTGGAATATTTTTCTTAGTAATTGCAGCTATGGTTACTTTCTATTCCTATAATTTACTATCTTTGGTTCTAGAACACCAAGCTAAGTTGGGTAATCGTCAGCTTCGATTTCGAGACATGGCTCGCGACATTTTAGGTCCCAAGTGGGGTCGATATTTCGTAGGGCCAATTCAATTTGCGGTATGCTATGGGGTTGTAGTTGCTTGTATTCTTCTTGGTGGTCAATGCATGAAGGCAATTTATGTGTTGTCAAATCCAATTGGATCTATGAAGCTTTACGAGTTTGTCATCATATTTGGTTGCTTCATGTTGATTTTGGCTCAAATCCCCTCTTTTCACTCATTGAGACACATTAATCTTGTCTCTTTAGTTCTTTGCTTACTCTATAGTGCTTTTGCTGCTGCTGGCTCTATATATATTGGAAACTCATCAAAAGGACCGGAAAAGAATTATTCTTTAAAAGGTGATACTGAAAATCGAGTATTCGGAATCTTCAATGCTCTTAGCATTATTGCCACTACATATGGAAATGGAATCATTCCTGAAATTCAGGCTACCTTAGCTCCACCAGTAAAAGGAAAGATGTTCAAAGGATTAAGTGTTTGTTATGCTATAGTTATTGTCACTTTCTTTACTGTTACTATATCTGGTTACTGGGCATTTGGAAATGAATCTCAAGGTCTTATCTTAAGCAACTTTGTGGATAATGGGAAGCCATTATTGCCGAAATGGTTTATTTACATGAGCAATGCTTTTACTATAGCACAGTTGTCGGCAGTTAGTGCGGTGTACTTGCAACCTACAAATGAATTATTAGAGCAAACATTTGGAGATCCAAAAAGTCTTGAGTTCTCGACACGCAATGTTATCCCTCGAGTGATTTCTAGATCATTAGCCATTACTATAGCAACCATTTTAGCCGCCATGCTTCCATTTTTTGGGGACATAAACTCACTTATTGGAGCTTTTGGATTTATGCCACTTGACTTTGTTTTACCTGTAATTTTCTATAATTTGACATTTAAGCCATCTAAGAGAAGTACTATTTTCTGGTTGAATGTAACAATTGTTGTTGTTTTCTCTATTTTGGGAGCTATATCAGCAATTGCAGCTGTTAGACAGATAGTCCTTGATGCCAAAAATTATAAACTATTTGCTAATGTATGA 1383 0.3666 MSTLLPSSIAEHEKSEKQNISIQIQQKDVDAGALFVLKSKGSWVHCGYHLTTSIVAAPLLSLPYAFTFLGWTAGIFFLVIAAMVTFYSYNLLSLVLEHQAKLGNRQLRFRDMARDILGPKWGRYFVGPIQFAVCYGVVVACILLGGQCMKAIYVLSNPIGSMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLLYSAFAAAGSIYIGNSSKGPEKNYSLKGDTENRVFGIFNALSIIATTYGNGIIPEIQATLAPPVKGKMFKGLSVCYAIVIVTFFTVTISGYWAFGNESQGLILSNFVDNGKPLLPKWFIYMSNAFTIAQLSAVSAVYLQPTNELLEQTFGDPKSLEFSTRNVIPRVISRSLAITIATILAAMLPFFGDINSLIGAFGFMPLDFVLPVIFYNLTFKPSKRSTIFWLNVTIVVVFSILGAISAIAAVRQIVLDAKNYKLFANV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02255 460 PANTHER OS05G0424000 PROTEIN-RELATED 30 440 - -
Vivi5g02255 460 Pfam Transmembrane amino acid transporter protein 40 444 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02255 Vivi-Chr5 94615439 94620306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02255 132 460 Organic Solute Cotransporters AT1G08230 66.163 4.12e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02255 - - gmx:100791114 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02255 5 94615439 94620306 Vivi5g02255 5 94615439 94620306 ECH