Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02245 ATGGTTTTACTAACAACTCCTTGTTGTTCGTCACTTCGTCCCAAATACGTCGTCGTTCGATGCAATCGGAGTAGCGTTCATGAAAAATCAGAGAATGTGGAATCATCGAGAAACTCGCTTTCGTTCCCTCCATTCAAATCATCCAAGAGAGTGATTTTGGTTAGGCACGGACAGAGCACGTGGAATGCCGAAGGAAGAATCCAAGGTAGTTCTGATTTCTCCGTTCTTACAAAGAAAGGTGAGTCTCAGGCTGAGATTTCCCGTCAAATGCTCGCCGACGATAACTTCGACGCTTGTTTTGCAAGTCCTTTGGCACGATCAAAGAGAACCGCTGAAATCATTTGGGCACCTCGACAGCAGCCGATTATTCCCGAGTTCGACCTAAGGGAAATTGATTTGTATTCCTTTCAAGGTCTGTTGAAGAATGAGGGGAAAGCGAGATTTGGTTCGGCTTTTCATCAATGGCAGGTTGATCCTGTGAATTTTGTTATTGATGATCATTATCCCGTGAGAGAGTTGTGGGATCGTGCTAGGAACTGCTGGACTAAAATTCTAGCTCATGATAGCAGGTCTGTTCTTGTCGTTGCTCACAATGCTGTTAATCAGGCTCTTATTGCCTCAGCAATTGGTCTGGAGGCAGAGTACTTCAGAACTTTACTTCAGAGCAACTGTGGTGTAAGTGTGCTGGATTTCACTCCAAGACCGGAGGGCGGCTCTCCCCACATTTGCCTTAATCGCTTAAACCAGACCCCTGGTTCACCTGTTGCCGAAGGGAAATCTGGAGGTAGAGAGGCAAGCAAGCGGATCATACTTGTTTGTAATGGATCTACAGAAGGAAATACGGAGGAAGGTTTTATTTTTTCTGGTGATCAACCATTGAACATGCTTGGTGTTATACAGTCTCAGAAATCTGCAGAGCTACTTCTTGATTCAAAAGTGAGTTCCATAATTAGCAGTCCTAACAAATCTTGTATTGAGACAGCCATGGCCATTTTCCAGGTTCAAAAAGCTGCAGATTGCTTGGGTGCCGACTCTGTGCCACGCTATGTTGAGATGAAGCAGATGGATAACATTAATTTTGGAACTATCTTTAAACAATCCAAAACGGATGTATCGAGTTTCCCTCCATCTCAGCCTGGATGGTTAAATAAAGTCGAAGATGACTCGAGAACAACATTATGGGATCAATCTGGAAAAGCCTGGCAAACCCTGCTGGATGAAATATCCGATGAATCTAAGTCAGGAGAAGTCGTAGTTGCAGTTTCTCATCCTGCGATTCACATAGGGCTAATGGCACACTGCCTTAACTTGACCAAGGAATGGCTAGGATCATTTCATCTTGACGCAGGGAGTGTTAGCGTCCTCGACTTCCCAGATGGACCTAAGGGAAGAGGCGTAATCAGGTGCATAAATTACACTGCACATTTGGGGAGATGGTCCATCCCTATTACAAAACCAACAGAGGATGTTCAAGAATCTTAG 1482 0.446 MVLLTTPCCSSLRPKYVVVRCNRSSVHEKSENVESSRNSLSFPPFKSSKRVILVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAEISRQMLADDNFDACFASPLARSKRTAEIIWAPRQQPIIPEFDLREIDLYSFQGLLKNEGKARFGSAFHQWQVDPVNFVIDDHYPVRELWDRARNCWTKILAHDSRSVLVVAHNAVNQALIASAIGLEAEYFRTLLQSNCGVSVLDFTPRPEGGSPHICLNRLNQTPGSPVAEGKSGGREASKRIILVCNGSTEGNTEEGFIFSGDQPLNMLGVIQSQKSAELLLDSKVSSIISSPNKSCIETAMAIFQVQKAADCLGADSVPRYVEMKQMDNINFGTIFKQSKTDVSSFPPSQPGWLNKVEDDSRTTLWDQSGKAWQTLLDEISDESKSGEVVVAVSHPAIHIGLMAHCLNLTKEWLGSFHLDAGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITKPTEDVQES 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02245 493 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 264 459 - -
Vivi5g02245 493 SMART PGAM_5 268 430 IPR013078 -
Vivi5g02245 493 SMART PGAM_5 50 204 IPR013078 -
Vivi5g02245 493 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 53 62 IPR001345 GO:0003824
Vivi5g02245 493 SUPERFAMILY Phosphoglycerate mutase-like 49 242 IPR029033 -
Vivi5g02245 493 CDD HP_PGM_like 50 237 IPR013078 -
Vivi5g02245 493 Pfam Histidine phosphatase superfamily (branch 1) 51 233 IPR013078 -
Vivi5g02245 493 Pfam Histidine phosphatase superfamily (branch 1) 269 460 IPR013078 -
Vivi5g02245 493 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 260 480 - -
Vivi5g02245 493 CDD HP_PGM_like 268 468 IPR013078 -
Vivi5g02245 493 Gene3D - 261 480 IPR029033 -
Vivi5g02245 493 SUPERFAMILY Phosphoglycerate mutase-like 267 481 IPR029033 -
Vivi5g02245 493 FunFam Phosphoglycerate mutase 49 253 - -
Vivi5g02245 493 Gene3D - 49 251 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02245 Vivi-Chr5 93471401 93477139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02245 K22200 - gmx:100794084 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02245 5 93471401 93477139 Vivi5g02245 5 93471401 93477139 ECH