Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02201 ATGCTTAAATCTTCTGAACAAAAAGATGGATCTGAAATCGAACCACCAAACTGCATCGATTTGTTTACTCAATTAGCATCAACAAAACCTAAACTCAACAATTTCCCTATGAAACGCACCGTTCGTCCTCTCTTCGTTCTCCTCCTTCTTCTCGTCTTCCTCGCCACGTTAACCTCGCGCTCCATTCTTCGTAGAGGTATAATCTCAATCGAGCTCGAAACGCGTGTGATCAATCGCGATTCATCGTTAAACGCCACGCTTCTCAAACACGCTGCGGTCGAGATCGGCGAGGAGAAATCCCGGAAAGAGATTCAGCAGCTTCTTGATGGTAACTTTGCTAGTCAAGCTAGGCATAGAACGTTTGTTTCGTGGCGGAGGTTTATCCATCATGACGGTGATAGAAACTTTCCGGCAACACTCCGTTCGCCGCTTTTTTATCGGTATTGGATTGATTTCCGGCGAGTTTTGCATGATTGGGCAAGGAAGCGTAGGTTTCAACCAGGGATAATGACTGAGTTAACTCGGTCGGTGAAGGTTCCACTCGATCGGTTTAACAAACTTGCTACCGATTCTATTGATAAAAAGTACTCTTCTTGTGCTGTTGTTGGTAATAGTGGGATTTTGCTTAATAGAAACTATGGTTCGTTAATTGATGCGCATGAGTTTGTTATAAGGTTAAACAATGCTAGGGTTGATAACTATGAAAACAAAGTTGGGAAGAAAACGAGTATTTCGTTTGTGAATAGCAACATTTTGCATTTGTGTGCAAGAAGAACAGGGTGTTTTTGTCATCCTTATGGTGCTAATGTGCCAATTGTTATGTACATTTGTCAAGCTGTGCATTTCTTGGATTATACCGTTTGTAATGCTTCTCATAAGTCTCCTTTGTTGGTTACAGATCCAAGGTTTGATGTGTTGTGTTCTAGGATTGTGAAGTATTACTCATTGAAGAGGTTTGTGGAGGAGACAGGGAAGGGTTTGGAGCAATGGGGTTCTGCTCATGATGGTGCTTTGTTTCATTATTCTTCTGGTATGCAGGCTGTGATGTTGGCTTTAGGGGTATGTGATAAAGTTAGTATTTTTGGGTTTGGTAAATCACCTTCTGCTAAACATCATTATCATACTAATCAGAAAGTTGAACTTCATTTGCATGACTATGAGGCTGAGTATGCTTTTTATCGGGACCTTGTGGATGGACATAAGCCTATACCTTTTGTATCAGAGAAGTTTAAGATTCCTCCTGTTGTAATGTATCATTGA 1260 0.4111 MLKSSEQKDGSEIEPPNCIDLFTQLASTKPKLNNFPMKRTVRPLFVLLLLLVFLATLTSRSILRRGIISIELETRVINRDSSLNATLLKHAAVEIGEEKSRKEIQQLLDGNFASQARHRTFVSWRRFIHHDGDRNFPATLRSPLFYRYWIDFRRVLHDWARKRRFQPGIMTELTRSVKVPLDRFNKLATDSIDKKYSSCAVVGNSGILLNRNYGSLIDAHEFVIRLNNARVDNYENKVGKKTSISFVNSNILHLCARRTGCFCHPYGANVPIVMYICQAVHFLDYTVCNASHKSPLLVTDPRFDVLCSRIVKYYSLKRFVEETGKGLEQWGSAHDGALFHYSSGMQAVMLALGVCDKVSIFGFGKSPSAKHHYHTNQKVELHLHDYEAEYAFYRDLVDGHKPIPFVSEKFKIPPVVMYH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02201 419 Pfam Glycosyltransferase family 29 (sialyltransferase) 186 398 IPR001675 GO:0006486|GO:0008373
Vivi5g02201 419 PIRSF Sialyl_trans 36 401 IPR012163 GO:0006486|GO:0008373
Vivi5g02201 419 Gene3D Glycosyl transferase family 29 97 402 IPR038578 -
Vivi5g02201 419 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 37 419 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02201 163 371 Glycosyltransferase AT3G48820 22.642 2.78e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02201 K00786 - gmx:100789506 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02201 5 91109289 91111444 Vivi5g02201 5 91109289 91111444 ECH