Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02196 ATGGTTTATCAAGGAACTCAACTTCCTCCACCAAACAGTGATGATTCTGTTAATGGTGGTGGGAATTGTGATGTGGTTTCATCAAGGATTAGGCTTAGTGATGGAAGGTACCTTGCTTATAGAGAAATGGGTGTTGCAAAGGACAAAGCTAAGCATAGTATTGTTGTTGTTCATGGATTTGGAAGCTCTAAAGATATGAACTTTCCAGCATCCCAGGAACTAATAGATGAACTAGGAGTATATATTCTGCATTATGATCGAGCTGGTTATGGACAAAGTGATCCAAACCCGAAACGCACACTGAAAAGTGAAGCACTTGACATTGAAGAACTTGCTGATCAGTTACAAATAGGATCAAAGTTTTATGTGATTGGAGTTTCAATGGGATCGCATGCTACTTGGAGTTGTCTCAACTATATCCCTAACAGGCTAGCTGGTGTGGTGATGATAGCACCAACCATCAACTATGAATGGCCTTCCCTTCCAAAGAGTCTTGTAAAGGATGATTATAGAAGGAAACTTATCAAGATAGCTATGTGGCTTGCAAGGTATTCCCCTCGACTGTTACACTGGTGGGTGACTCAAACATGGCTCCCTTCCAATTCTGTCATAGAGAAAAACCCAGCATTCTTCAACAAAAGAGATATTGAAATTTTAGAGAGAATTCCCGGGTTTCCGATGCTTACTAAGGATATGCTGAGGCACCAAGTTGTTTTTGACACTCTAAGGGGTGATTGGATGATTGCCTTTGGAAAGTGGGAATTCGATCCAATGAAGCTTAGTAATCCATTCCCTGACAAAAACCGAACTCCGGTTCACATTTGGCAAGGCTATGAAGACAAAGTAGTTCCCTCTCAAATTCAAAGATTCATTTCAGAAAAGCTACCATGGATACAATATCATGAAGTTATAGACGGTGGCCATTTGATTGTACATTATAGTGGCTTAGGTGAGGCAATTTTGAAGGCACTGTTACTTGGAGAAGAAGATACTTCATATAAACCTAGATCATCAATATCTGTATCTTGA 1029 0.4004 MVYQGTQLPPPNSDDSVNGGGNCDVVSSRIRLSDGRYLAYREMGVAKDKAKHSIVVVHGFGSSKDMNFPASQELIDELGVYILHYDRAGYGQSDPNPKRTLKSEALDIEELADQLQIGSKFYVIGVSMGSHATWSCLNYIPNRLAGVVMIAPTINYEWPSLPKSLVKDDYRRKLIKIAMWLARYSPRLLHWWVTQTWLPSNSVIEKNPAFFNKRDIEILERIPGFPMLTKDMLRHQVVFDTLRGDWMIAFGKWEFDPMKLSNPFPDKNRTPVHIWQGYEDKVVPSQIQRFISEKLPWIQYHEVIDGGHLIVHYSGLGEAILKALLLGEEDTSYKPRSSISVS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02196 342 MobiDBLite consensus disorder prediction 1 21 - -
Vivi5g02196 342 FunFam Alpha/beta-Hydrolases superfamily protein 24 325 - -
Vivi5g02196 342 SUPERFAMILY alpha/beta-Hydrolases 27 311 IPR029058 -
Vivi5g02196 342 Gene3D alpha/beta hydrolase 21 319 IPR029058 -
Vivi5g02196 342 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 2 328 - -
Vivi5g02196 342 Pfam Alpha/beta hydrolase family 54 311 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02196 Vivi-Chr5 90976409 90979150 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02196 - - tpra:123919579 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06363 2 198940104 198953460 Vivi5g02196 5 90976409 90979150 ECH
Vivi5g02196 5 90976409 90979150 Vivi5g02196 5 90976409 90979150 ECH
Vivi2g06363 2 198940104 198953460 Vivi5g02196 5 90976409 90979150 PCT