Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02173 ATGCAAATCAATTCCCTAAGTTTTGGAATAAACTATGGACAAATAGCAAACAATCTACCATCTCCTTCTAGAGTAGCTCTTCTCATAAGATCAATGAATGTCACAAAAATCAAACTCTATGATGCTGATCCAAATGTTCTGCTTGCTTTCTCTCATTCAAATGTTGAATTTGTTATAGGAATTGGAAATGAGAATCTACAAAACATGACAAACCCTTCAAAAGCTCAAAGTTGGATTCAACACCATGTTCTACCTTACCTTTCACAAACCAAAATAACTTCCATAACTGTTGGAAATGAAGTTTTCAATAGTAACAATACTCAATTGATGTTAAATCTTTTACCTTCGATGCGAAATGTGCATACCGCGCTTGTTAATCTCGGGTTAGACCGATTAATTAGCGTGGCAACGGCTTTTTCTTTCAACATTTTGGAAAATTCTTACCCTCCTTCGTCCGGTTCTTTTAAAGAAGAATTGATTCAATATATTCAACCACTAGTTGAATTTCTCGACGAAATTAAATCGCCTTTTCTTATCAATGCTTACCCTTTTTTTGCATACAAAGATAACCCTAATGAGGTACCTTTGAACTATGCATTATTTCAACCTAATCAAGGTTTGGTTGATCCAAATACAAATCTGCATTATGATAACATGTTGTATGCACAAATTGATGCTGTTTATGCTGCAATCAAAGTGCTAGGGTTTATGAATATTGAAGTTAGGGTTTCTGAGACAGGTTGGCCTTCTAAGGGTGATTCTGATGAAATTGGAGCTACAATAGAGAATGCAAAATTGTATAATGGAAATTTGCTTAGAAGAATTGAAGAGAAACAAGGAACTCCTGGAAAGCCTTTGGTTCCAATTGATGTATATGTGTTTGCACTTTTTAATGAAGATATGAAAAATGGTCCTGCTTCAGAGAGAAACTATGGTCTTTATTATCCAGATGGTAGCCCTGTTTATAACATTGGATTGCAAGGTTATCTTCCTCAAATGGTTCTGCCATCATCCAAATCTAATGTTTTGTCTTTCAATTTTCTTGTATGGATAGTAATTACATGCTTGATCTTTGCTTGGGAGCTTTCAGGATTGGAAGCATGGGAAATTCTATAA 1116 0.3477 MQINSLSFGINYGQIANNLPSPSRVALLIRSMNVTKIKLYDADPNVLLAFSHSNVEFVIGIGNENLQNMTNPSKAQSWIQHHVLPYLSQTKITSITVGNEVFNSNNTQLMLNLLPSMRNVHTALVNLGLDRLISVATAFSFNILENSYPPSSGSFKEELIQYIQPLVEFLDEIKSPFLINAYPFFAYKDNPNEVPLNYALFQPNQGLVDPNTNLHYDNMLYAQIDAVYAAIKVLGFMNIEVRVSETGWPSKGDSDEIGATIENAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDMKNGPASERNYGLYYPDGSPVYNIGLQGYLPQMVLPSSKSNVLSFNFLVWIVITCLIFAWELSGLEAWEIL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02173 371 Pfam Glycosyl hydrolases family 17 9 324 IPR000490 GO:0004553|GO:0005975
Vivi5g02173 371 SUPERFAMILY (Trans)glycosidases 8 325 IPR017853 -
Vivi5g02173 371 FunFam Glucan endo-1,3-beta-glucosidase 14 6 330 - -
Vivi5g02173 371 Gene3D Glycosidases 7 330 - -
Vivi5g02173 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 327 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02173 Vivi-Chr5 90036465 90038097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02173 58 360 Glycoside Hydrolase AT2G27500 63.816 2.08e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02173 - - vvo:131606843 747.658