Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02143 ATGGCTTCGCCGCCACGAAAACCTCGCAACCGTGAAATGCTCTTCGACTCCGTCATCGCTCTCGTCTTCATCCTCGTCGCCTGCGTCGACTTCTGTGACGGCGCCACTGTTGTTGACGTCTACCGCCTAATCCAATACGACATGTCCGGTGTTCCGTTCGGATCTCGACTCGCGAGCCTCAACCACCATGCCGCTTCACTTCATTTCTCTCCTCACGCCGATCTCTCGCGCACTGTTCTTCTTATTCCTCTTCGTGAACTCAACATGTCCTTTGTTCAAGAGTACATTGTTGCTGGCAAGCCTCTGGGGGGTTTAATATTTTTGCTGCCCCAGATGTTCAATTTTGAAAACAAAGGTGGTGTGGGAAGTAATGGTGACGATGGGAGCAAAGAACTGCTGAAGAGTGTGTTGGCTGAGCTTGAACAAATACTTATACATGCCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTGATGCCGTGTTATTGGATATCAAGAAGAATGATGCCTCTGGTCAGCCTGCCACTGCAACTACTGGCGGGTACAAATTTGTCATTTCAGCCACTGAGCCAAAAAAAGTTGCATCTCCACCCATTACAAATATTCAGGGATGGTTGTCAGGGCTGAAGACAGATGGTGATTCACATCAATTACCCACCATTGCGATAGTGGCATCATATGACACTTTTGGGGCTGCACCGGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGCATTGTGGCTCTTCTCGAAGTAGCTAGATTGTTTTCTCTTTTATATTCTAATCCGAAGACAAGAGGGCAATACAATTTGCTTTTTGGGCTAACGTCTGGCGGGCCTTACAACTACAACGGAACCCGCAAGTGGCTTCAAAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCAATTTGCTTAGATAGTATTGGCTCGTGGGAAAATGAATTATGGATTCATGTGTCTAAACCTCCAGAAAATGCCTTTATTAAGCAAATTTTAGAAGATTTTTCAAGTGTTGCAGAAGAGTTGGGTGTCCAAGTTAATCTGAAACATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACGGCTGCTACCCTCTCTGAACTCTCTACAGCACCTGAATTGCTAGAGAGCACTGGTGGTTTGCTTGATGGCAGGCAATTTGTCAATGAAGCAGCGATTGTCAGAAGTGTGAAACTAATTGCCGAGTCTCTTGCGAAGCATATTTATGGGCATCAAGGGAAGAACGTACAGATTTTTGCGAACAACAGTAACTTGGCTGTTAATCCTTCTTATGTTAGATCATGGTTAGATGTTTTGTCGCGAACACCTCGAGTAGCACCATTTTTATCAAAAGACGATCCTTTTGTTACGGCATTGAAAAAGGAATTAGAAGATCATACAGATGAAGTCAATGTGCAAAGAGAAATACTAGATGGGATGTTCACTTTCTATGATTCAACTTCGGCAAAGTTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTACTGTTGCTTCTAGTGTTGGGATCATATTTAATCGTCCTCTTCAGTTTCTTGGTCATCACTACTAGGGGTCTTGATGATCTAATCAGTTTATTTCGGCGGCCTCCTTCTAGAAAAGTGAAGACAGCATAA 1695 0.436 MASPPRKPRNREMLFDSVIALVFILVACVDFCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVQEYIVAGKPLGGLIFLLPQMFNFENKGGVGSNGDDGSKELLKSVLAELEQILIHANLPYPVYFAFEDDNIDAVLLDIKKNDASGQPATATTGGYKFVISATEPKKVASPPITNIQGWLSGLKTDGDSHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAFIKQILEDFSSVAEELGVQVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLESTGGLLDGRQFVNEAAIVRSVKLIAESLAKHIYGHQGKNVQIFANNSNLAVNPSYVRSWLDVLSRTPRVAPFLSKDDPFVTALKKELEDHTDEVNVQREILDGMFTFYDSTSAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02143 564 Coils Coil 475 495 - -
Vivi5g02143 564 CDD M28_nicalin_like 137 430 - -
Vivi5g02143 564 PIRSF Nicalin 5 559 IPR016574 GO:0009966|GO:0016020
Vivi5g02143 564 PANTHER NICALIN 14 564 IPR016574 GO:0009966|GO:0016020
Vivi5g02143 564 SUPERFAMILY Zn-dependent exopeptidases 194 389 - -
Vivi5g02143 564 Gene3D Zn peptidases 157 413 - -
Vivi5g02143 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Vivi5g02143 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Vivi5g02143 564 Pfam Nicastrin 225 362 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02143 7 562 EF-hand Containing Proteins AT3G44330 75.000 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02143 K26499 - gmx:100779713 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02143 5 89017852 89027793 Vivi5g02143 5 89017852 89027793 ECH