Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02140 ATGGTTGTTGCTTCAACACCATCGGAAGGAAAAACCGAAACCATGATGGCTGCTTCATCATCATCATCAACATCAAGCATCATCACCATGCATCATGACATCATCCATACACACATCCTCACACGCCTCGACGCCGCCACGCTGGCAACAACCGCCTCCACTTGCTCTCACCTCCGCCACCTCTGTATAGACGACAATCTCTGGCGAAAAATCTGCACCGCCACGTGGCCTTCTTTAGCCGACCCCACCACCTGCCACATCATCTCAACTTTCCCAAACCGCCACCGTTCGCTCTTCTCCGACGCATTCCCGGTACTTCATCATTTCTCTTGCAACTCAAAGCCTCTTTCGTCTCCTCCTCCGATAGAGATCATCTCCGCCGTGGATGTTTTCTACAAAGGTAAGCCGGTGTTCTCGAGAGTTCGGCGAACCGAAACAACAAAGAATTCATTTCTTTCATCTCCGCTATGGATTGAAATTCTAGAGCCGAACGAGTTAGTTCCGACGGAGGTGAAGTTCGTGAGAAAGGACGATGAACTGCTGAAGCATTTGGAGGAGAATTTATCCTTAAGCTGGATCCTACTCGATCCCACCGGGAAACGATCGGCGAATGTTTCGAGCCGGAAGCCGGTTTTAGTACGGCGGCACTGGCTAACAAGAGACGTGGAGATTCTCTTTGCAGTGACGATGGCGGGGGAGGCGCGACGCGCGACGGAGACAGTGCAGTGTACGGTGAAGGTCACGTGCTGTGGGAAAGTCGGAGGGGAGTTGCACGTGAGGGAGGTGAGTTTAGTGATGGAGGATATGGATGGAGGGAAGGTGAGTGGGAAAGAAGGGGTTATGATTTTGCAGAAGGCGATGGAGTTTGGGGAGAGGAAGAAAGTGGGTGAAGTGGGAGAGATGATGGAGAGGTTTGATAGGTTTTTGAGTGTGGTTAGGGAGAGGAGAGAGAGGAAATATAGAAGACAGAAGGAAAGGGATGGTGTTTCTATGGTGGTTGCGTTTGTTGTTTGTGTTTGGTTTTGTTACCTTGCTGGTTTCTGA 1044 0.5067 MVVASTPSEGKTETMMAASSSSSTSSIITMHHDIIHTHILTRLDAATLATTASTCSHLRHLCIDDNLWRKICTATWPSLADPTTCHIISTFPNRHRSLFSDAFPVLHHFSCNSKPLSSPPPIEIISAVDVFYKGKPVFSRVRRTETTKNSFLSSPLWIEILEPNELVPTEVKFVRKDDELLKHLEENLSLSWILLDPTGKRSANVSSRKPVLVRRHWLTRDVEILFAVTMAGEARRATETVQCTVKVTCCGKVGGELHVREVSLVMEDMDGGKVSGKEGVMILQKAMEFGERKKVGEVGEMMERFDRFLSVVRERRERKYRRQKERDGVSMVVAFVVCVWFCYLAGF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02140 347 Gene3D - 13 114 - -
Vivi5g02140 347 PANTHER F-BOX PROTEIN-RELATED 19 342 IPR045283 -
Vivi5g02140 347 Pfam F-box domain 37 70 IPR001810 GO:0005515
Vivi5g02140 347 MobiDBLite consensus disorder prediction 1 20 - -
Vivi5g02140 347 SUPERFAMILY F-box domain 32 96 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02140 Vivi-Chr5 88812217 88813533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02140 - - lang:109352354 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06325 2 198385343 198386586 Vivi5g02140 5 88812217 88813533 PCT