Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02113 ATGTCAATTTGTATGAGCATGAAGATAGAACAAGACACTGTGCTCAATCAGAAGCAAGGGATAGTCACTATTTTGAACTGTAACACTGACACTAATTTCACACCACCTTCTCTCAGAAGAACTCTCTCAGCAGACATGTCTTCCAAGAAATGGCTTTCTCAGAATGGTTCTTCTAACACCATCAAGAAGATTTCATCATCTAAGAATCTGTTTGGACAAGATGATGAAGCTAAGTTGGGTGATGATGAAGATGAAGCTGAGAGAGAGAGGCTTCAGATATGGAGTTCAATCCAGAAGAACAAGAAGGAAGAGCAACAGAAAGATGGTTCGTTTGATACTTGGGGTTCACTCATGTCTTTGAAGACTAATGATGAAATCTCTAAGTCGCTTCCACCTTACATTCATCCTCTCGCTAAGAGGACGAAAAGCTCTTTGTCTAGGAAGAGCCTTGAAATTTGCACTGAGAGTCTCGGGTCCGAGACTGGCTCTGATGGTTTGGTGTTCTCTTATCCACAATCATCAGAGAGTCCCGGATCCGAGACTAGATCTGATGGATTGATTTCCTCTTATCCTCCGTCAATTCTGACGGAAGGTATTGTGGATCAACAACAACAGACTCGGAAAGATCATGAAGAGGACAAGAAAGAAATGGAGGACGAAAAAGAAGAGGAAGTGGTGGAAGTGGAAAGGCTCGATTATAGTGGTGTTACTACAACTCATAAAAAGTCACCACCTCGATCCTTCCCTCCACCACTTCCTTCACTCTCTCGCCAAGACGGTCCTCCTCTTCAGATGAGGCCGCACCGCGACAACGGAAGGTTGGTTTTAGAAGCTGTATCTCTTCCTTCATTGAACAACTTCTGTGTTCAACGCCAAGGTGGCCGACTCGTCCTCACCTTCGCAAATCAAGACGAGGAAATTGCTGAAAATGACGAGGTAGGTGAGTTGGAGGAAGAATTTGAAGGATTCGAAGAAGAAAAAGAAGACGGCGATGAAGTTGATGAGGAATATGAGAGTGTGATAGGGAAAGGATCCTTGATGTCCTTTGAGAAAACTACTATAAAAAGTAGTGTTCATTGGATTGGCTCAAACCAAAACAACAAGGTGAATAAGACAATTGGGCTATTGAATAAGAATCCAAAGTGGTCAAAGAAGTTCAATCATGAAGTGGATAACAACAAAGATGTTCAAGTAGTGGAAGCTAGTCAAATTGTAAAATCACTTCCACCAAGGCCAAGAGTTGCAAGATTGATTCCTTCACCACCAAATGCAGCAACTGGTTCATTCAATCTAAATTCTTATCAACATTATTGGAGGACCACAAAACCAACATCAACCAAACTTGGTAATTATCCACTCGACCGATATCAAGAGAAAAACAACAACGACGACAACTACAACAACAACGACAGCAAGAGTAACAAGATTGTTGTGTCTGCAAAAGGCGAGATGAAGAACATGAACATGAACCGTGTTTCGAATGAGAAGCAACAACTTTTGGTTCTTAAAGGAAAGAATGGTGATTATTTGGTTCATAATTTGAAGAATTGCAAGGATTCAAGAAGGTCTTTTCTCTTTTGGGAGCCTTATTGCATTGCTACCTCATGA 1608 0.4148 MSICMSMKIEQDTVLNQKQGIVTILNCNTDTNFTPPSLRRTLSADMSSKKWLSQNGSSNTIKKISSSKNLFGQDDEAKLGDDEDEAERERLQIWSSIQKNKKEEQQKDGSFDTWGSLMSLKTNDEISKSLPPYIHPLAKRTKSSLSRKSLEICTESLGSETGSDGLVFSYPQSSESPGSETRSDGLISSYPPSILTEGIVDQQQQTRKDHEEDKKEMEDEKEEEVVEVERLDYSGVTTTHKKSPPRSFPPPLPSLSRQDGPPLQMRPHRDNGRLVLEAVSLPSLNNFCVQRQGGRLVLTFANQDEEIAENDEVGELEEEFEGFEEEKEDGDEVDEEYESVIGKGSLMSFEKTTIKSSVHWIGSNQNNKVNKTIGLLNKNPKWSKKFNHEVDNNKDVQVVEASQIVKSLPPRPRVARLIPSPPNAATGSFNLNSYQHYWRTTKPTSTKLGNYPLDRYQEKNNNDDNYNNNDSKSNKIVVSAKGEMKNMNMNRVSNEKQQLLVLKGKNGDYLVHNLKNCKDSRRSFLFWEPYCIATS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02113 535 Coils Coil 200 227 - -
Vivi5g02113 535 MobiDBLite consensus disorder prediction 161 202 - -
Vivi5g02113 535 MobiDBLite consensus disorder prediction 161 268 - -
Vivi5g02113 535 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 36 534 IPR021410 -
Vivi5g02113 535 Pfam Fantastic Four meristem regulator 247 300 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02113 Vivi-Chr5 86986257 86988777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02113 - - vvo:131606821 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06277 2 197662194 197663376 Vivi5g02113 5 86986257 86988777 PCT