Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02111 ATGGATGTTGATTCTTCCATGGTGGCGGAGAACGATCACGGTTCAGCGGTGCAGAGCAATGAAGAGAGGGAACAGATAGGGGAAACGCCGTCGTCATCTTCTTCTGGCGGTGGATCTCCTGCGGAGCTACAACCACAGCAGCAAGGTGCTGCTGCGGGTGCTCAGGTACAGCACAGTCCGGTTGTTGGTCCGAGGCTTGCTCCGAGTTATACAGTTGTGGATGCGATTTTGGAGAAGAAGGATGATGGACCGGGGCCAAGGTGTGGTCATACGTTGACGGCTGTGCCGGCGGTGGGTGAGGATGGAACACCTGGATATATTGGTCCGAGACTGATTTTGTTCGGTGGTGCGACTGCACTTGAGGGGAATTCCGCGGGTTCGGGGACTCCTACTTCTGCAGGAAATGCTGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATTACTCCCTTTGGAGAGCCTCCAACCCCAAGGGCTGCACATGTGGCCACTGCTGTGGGAACGATGGTAGTTATTCAGGGCGGCATTGGTCCTGCTGGATTGTCGGCAGAGGACCTTCATGTTCTTGATCTCACACAGCAACGACCAAGATGGCATAGAGTTGGTGTTCCAGGGCCTGGACCAGGGCCACGCTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTAGACACAGCTGCCAAGCCCTATGAATGGCGCAAATTGGAGCCAGAAGGAGAGGGTCCGCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGCGTTCCGTTGGCTAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTTTCACCATCTTCAAGATATCAGCATGCAGCGGTGTTTGTAAATGCAAGACTCCATGTGTCTGGCGGGGCTCTTGGTGGAGGACGGATGGTAGAAGATTCATCTAGTGTTGCAGTGTTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCCGTTGTTACCAGTCCAAGGACGGGGAGATACAGTGCTGATGCAGCTGGGGGAGATGCCTCCGTCGAGTTGGTCCGGCGTTGCAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTACGGTGGTTTACGTGGTGGAGTCTTGCTGGATGACCTGCTTGTTGCTGAAGATCTTGCTGCTGCAGAAACAACAAGTGCTGCTTCGCATGCTGCTGCTGCAGCAGCTGCGTCTGATGTACACATGGGACGAGTACCAGGAGGATATGGATTTGTTGATGATAGAACAGGGCAAACAATGTCTGATGCAGCTGCTGATGGTGCAGTTGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGTGACATGTATACTGATATCAGCACTGAAAATGCATTGCTTCAGGGAACTAGGAGAACTAGCAAAGGAGTTGAATATCTGGTTGAAGCATCTGCTGCAGAAGCTGAAGCTATCAGTGCCACACTGGCTGCTGCCAAGGCGCGGCAAGAGAATGGAGAAGTTGAATCACCAGATCGGGATCGTGGGGCTGAGGCTACTCCTAGTGGGAAACAAATATCTTCCATGATTAAGCTTGAATCTGCAGGCCCAAATAGTATTGCTTCTGGTGGAGTTAGGCTGCATCACAGAGCTGTGGTTATTGCCGCAGAGACTGGTGGTGCATTAGGTGGCATGGTTAGGCAACTTTCGATTGATCAGTTTGAAAATGAAGGTAGACGGGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAGTTATTAGATCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTCATAGCACACCTCTTAAAGCCTCGTGGCTGGAAACCACCAGTTCGACGGCAGTTTTTCTTGGATTGCAATGAAATTGCAGATCTCTGTGATAGTGCAGAGAGGATATTTTCTAGCGAACCTACTGTCATACAGCTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAATTTGGGGATCTCATGCGCCTTTTTGATGAGTATGGTTCACCATCAACTGCCGGTGACATAGCATATATCGATTATCTATTCCTCGGAGATTATGTTGATAGGGGCCAACACAGCCTGGAAACTATAAGCCTTCTGCTTGCTTTGAAGGTTGAGTATCCAAACAATGTTCACTTAATACGTGGAAATCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGACATGGCACCGGATAAACCGTCTGTTTAACTGGCTCCCTCTTGCCGCTCTAATTGAGAAAAAAATCATTTGCATGCACGGGGGTATTGGCCGTTCAATAAATCACTTGGAACAAATTGAGAATATTCAGCGTCCTATTACAATGGAAGCAGGATCGATTGTGCTGATGGATCTTTTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGTCTGCGACCAAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTAATGGAATTTTGCAATAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGTTTTGAGCGTTTTGCACAGGGACATTTAATCACCCTTTTCTCAGCTACAAATTACTGTGGTACCGCAAATAATGCTGGAGCAATATTAGTTTTGGGGAGGGATCTTGTGGTGGTTCCTAAACTGATTCATCCATTACCACCTGCACTTTCTTCACCAGAAACATCACCAGAACGTCAGAATGAAGATACTTGGATGCAGGAGTTGAATGCAAACAGACCACCAACTCCAACTAGAGGTCGTCCTCCAGGAGCAAATGACCGTGGCTCGCTGGCTTGGATATAA 3006 0.4857 MDVDSSMVAENDHGSAVQSNEEREQIGETPSSSSSGGGSPAELQPQQQGAAAGAQVQHSPVVGPRLAPSYTVVDAILEKKDDGPGPRCGHTLTAVPAVGEDGTPGYIGPRLILFGGATALEGNSAGSGTPTSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELVRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASDVHMGRVPGGYGFVDDRTGQTMSDAAADGAVVLGNPVAPPVNGDMYTDISTENALLQGTRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVESPDRDRGAEATPSGKQISSMIKLESAGPNSIASGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVIQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHLEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPETSPERQNEDTWMQELNANRPPTPTRGRPPGANDRGSLAWI 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02111 1001 FunFam Serine/threonine-protein phosphatase 634 974 - -
Vivi5g02111 1001 Gene3D - 69 192 IPR015915 GO:0005515
Vivi5g02111 1001 MobiDBLite consensus disorder prediction 543 566 - -
Vivi5g02111 1001 Pfam Calcineurin-like phosphoesterase 698 905 IPR004843 GO:0016787
Vivi5g02111 1001 Pfam Galactose oxidase, central domain 222 275 - -
Vivi5g02111 1001 Pfam Kelch motif 329 374 IPR011498 GO:0005515
Vivi5g02111 1001 Gene3D - 193 453 IPR015915 GO:0005515
Vivi5g02111 1001 FunFam Serine/threonine-protein phosphatase 267 467 - -
Vivi5g02111 1001 SUPERFAMILY Kelch motif 142 431 IPR015915 GO:0005515
Vivi5g02111 1001 MobiDBLite consensus disorder prediction 974 1001 - -
Vivi5g02111 1001 SUPERFAMILY Metallo-dependent phosphatases 655 960 IPR029052 -
Vivi5g02111 1001 MobiDBLite consensus disorder prediction 1 58 - -
Vivi5g02111 1001 FunFam Serine/threonine-protein phosphatase 66 263 - -
Vivi5g02111 1001 Gene3D - 634 976 IPR029052 -
Vivi5g02111 1001 MobiDBLite consensus disorder prediction 546 560 - -
Vivi5g02111 1001 SMART pp2a_7 670 954 IPR006186 GO:0016787
Vivi5g02111 1001 CDD MPP_Bsu1_C 650 952 IPR041758 -
Vivi5g02111 1001 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1001 - -
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 834 861 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 733 760 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 804 830 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 894 914 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 698 725 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 766 790 IPR006186 GO:0016787
Vivi5g02111 1001 PRINTS Serine/threonine phosphatase family signature 916 932 IPR006186 GO:0016787
Vivi5g02111 1001 PIRSF STPPP_BSU1 37 1001 IPR012391 GO:0004721|GO:0009742
Vivi5g02111 1001 MobiDBLite consensus disorder prediction 11 54 - -
Vivi5g02111 1001 ProSitePatterns Serine/threonine specific protein phosphatases signature. 767 772 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02111 Vivi-Chr5 86940793 86959040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02111 662 897 Calmodulin-binding Proteins AT5G63870 29.412 1.34e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02111 5 86940793 86959040 Vivi5g02111 5 86940793 86959040 ECH
Vivi2g06273 2 197612397 197624891 Vivi5g02111 5 86940793 86959040 PCT