Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06273 ATGGACGTTGATTCCTCGATGGTTCAAGCGGCCGATCACGATTCTGTTGTGCAGAAGCAAACTGCTTCTGCTCCGGCGCCGGTTGTAGTGAAAGAAGAGCAGCTTCCGGAACCGCCGTCGTCTGGCGGCGGATCTCCGGCGGAGATGCCACAACAGCAGCAGCAAGGGGCTAATGATGCGCAGCAGAGTCCGGTGGTTGGGCCGAGGTTAGCGCCGAATTACACTGTGGTGGATGCGATTCTGGAGAAGAAGGAGGATGGACCGGGGCCGAGGTGTGGACATACGTTGACGGCGGTTGCAGCTGTTGGAGAGGAGGGGACGCCGGGGTATATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCTACTGCTCTTGAAGGAAATTCTGCGGGTTCGGGGACTCCTTCGTCAGCTGGAAATGCTGGAATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGCTAACTCCGTTTGGAGAACCTCCAACGCCAAGGGCTGCCCATGTGGCAACTGCCGTGGGAACCATGGTGGTAATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCGGCAGAAGACCTTCATGTTCTTGATCTCACTCAGCAATGGCCCCGATGGCATAGAGTATCTGTTCAAGGCCCCGGACCAGGGTCACGTTATGGACATGTGATGGCTTTGGTGGGCCAGAGGTATCTTATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCTAAGCCATATGAATGGCGCAAGTTAGAGCCAGAAGGAGAGGGCCCACCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTCTGCTCTGTGGAGGAAGGGATGCCAATAGTGTTCCATTGGCTAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTATTTGTTAATGCAAGGCTGCATGTGTCTGGTGGGGCTCTAGGTGGAGGCCGGATGGTTGAAGACTCTTCAAGTGTTGCAGTATTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCGGTTGTTACCACTCCAAGAACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCAGCAGTTGAGTTGACTCGACGTTGTAGGCATGCTGCTGCTGCTGTTGGTGACCTGATTTTTATTTATGGTGGTTTAAGAGGGGGAGTCTTGCTGGATGACCTACTTGTTGCCGAAGATCTTGCTGCTGCTGAAACAACATCTGCTGCTTCACATGCTGCTGCTGCTGCAGCTGCATCTAATGTTCAAGCAGGACGCTTGCCTGGACGATATGGATTTGATGATAGGCCCAGGCAAACAATGACTGAAGTGGCTGCTGATGGTTCTGTTGTATTGGGAAATCCAGTTGCACCCCCAATGAATGGTGACATTTATACTGACATCAGCACTGAAAATGCTATACTTCAGGGATCTCGTAGAACTGCCAAAGGAGTTGAGTATCTGGTTGAAGCATCTGCTGCAGAAGCCGAAGCTATTAGTGCTGCATTGGCTGCTGCCAAGGCACGGCAAGAAAATGGAGAAGTGGAATTACCTGATAGAGACCGTGGGGCTGAGGCTACCCCTAGTGGGAAACACACATCTTCCCTGATTAAGCCTGATTCTGTAGGGTCAAATAACAATGTTTCTGGTGGAGTTCGGCTGCATCATAGAGCTGTAGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATCGATCAATTTGAAAATGAAGGCAGGCGGGTCAGTTATGGCACTCCAGAAAATGCAACTGCTGCTAGAAAGTTATTAGATCGGCAGATGTCCATCAATAGTGTGCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCTGTGCGCCGGCAATTTTTCTTAGATTGTAATGAAATTGCTGATCTTTGTGATGGTGCCGAGCGGATATTTTCAAGTGAACCAAGTGTCTTACAACTAAGTGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTCATGCGCCTTTTTGACGAGTATGGTGCACCATCGACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTACGTTGATCGAGGACAGCACAGCTTAGAAACTATAACCCTTCTTCTTGCCCTGAAGGTTGAATATCCCAACAATGTACATTTAATACGTGGAAATCATGAAGCTGCAGATATTAACGCCCTTTTTGGTTTTCGAATTGAGTGTATCGAGAGGATGGGCGAGAGAGACGGAATTTGGACGTGGCATCGGATTAACCGGCTATTTAATTGGCTTCCTTTAGCTGCTTTAATTGAGAAGAAGATTATTTGCATGCATGGAGGTATTGGTCGTTCAATAAATCATGTAGAACAAATTGAGAATATTCAGCGGCCAATTCCGATGGAAGCGGGGTCAATTGTGCTTATGGATCTGTTATGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGACTGAGGCCAAATGCTAGAGGTCCTGGACTAGTTACTTTTGGGCCTGATCGAGTGATGGAATTTTGCAACAACAATGATCTTCAGCTAATTGTCCGTGCACATGAATGCGTGATGGATGGGTTTGAGCGTTTTGCTCAGGGACATCTGATCACACTTTTCTCGGCTACAAATTATTGTGGCACTGCAAATAATGCAGGAGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCATCCGTTACCGCCCGCAATATCTTCACCAGAAACATCACCAGAACGGCATATTGAAGATACTTGGATGCAGGAGTTGAATGCCAACAGACCACCAACACCAACTAGAGGCCGTCCCCCAGTTACCAACGACCGAGGTTCACTCGCTTGGATATAG 3015 0.4846 MDVDSSMVQAADHDSVVQKQTASAPAPVVVKEEQLPEPPSSGGGSPAEMPQQQQQGANDAQQSPVVGPRLAPNYTVVDAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAGSGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTSAASHAAAAAAASNVQAGRLPGRYGFDDRPRQTMTEVAADGSVVLGNPVAPPMNGDIYTDISTENAILQGSRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKHTSSLIKPDSVGSNNNVSGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDGAERIFSSEPSVLQLSAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06273 1004 ProSitePatterns Serine/threonine specific protein phosphatases signature. 770 775 IPR006186 GO:0016787
Vivi2g06273 1004 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1004 - -
Vivi2g06273 1004 FunFam Serine/threonine-protein phosphatase 637 977 - -
Vivi2g06273 1004 PIRSF STPPP_BSU1 35 1004 IPR012391 GO:0004721|GO:0009742
Vivi2g06273 1004 FunFam Serine/threonine-protein phosphatase 70 267 - -
Vivi2g06273 1004 SUPERFAMILY Kelch motif 146 435 IPR015915 GO:0005515
Vivi2g06273 1004 Gene3D - 51 268 IPR015915 GO:0005515
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 549 564 - -
Vivi2g06273 1004 SUPERFAMILY Metallo-dependent phosphatases 658 964 IPR029052 -
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 1 68 - -
Vivi2g06273 1004 Pfam Kelch motif 332 378 IPR011498 GO:0005515
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 547 586 - -
Vivi2g06273 1004 Gene3D - 269 460 IPR015915 GO:0005515
Vivi2g06273 1004 FunFam Serine/threonine-protein phosphatase 271 471 - -
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 980 1004 - -
Vivi2g06273 1004 Gene3D - 637 975 IPR029052 -
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 807 833 IPR006186 GO:0016787
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 701 728 IPR006186 GO:0016787
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 736 763 IPR006186 GO:0016787
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 897 917 IPR006186 GO:0016787
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 769 793 IPR006186 GO:0016787
Vivi2g06273 1004 PRINTS Serine/threonine phosphatase family signature 919 935 IPR006186 GO:0016787
Vivi2g06273 1004 SMART pp2a_7 673 957 IPR006186 GO:0016787
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 565 586 - -
Vivi2g06273 1004 Pfam Calcineurin-like phosphoesterase 701 908 IPR004843 GO:0016787
Vivi2g06273 1004 CDD MPP_Bsu1_C 653 955 IPR041758 -
Vivi2g06273 1004 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06273 Vivi-Chr2 197612397 197624891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06273 665 900 Calmodulin-binding Proteins AT5G63870 29.412 6.14e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06273 - - gmx:100790406 1775.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06273 2 197612397 197624891 Vivi5g02111 5 86940793 86959040 PCT