Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02110 ATGGGAAAGAATCCAAAGAACGAGCTAGGTAGGGCTCTTGTGAAGCAACACAATCACATGATTCAACAAACCAAGGAGAAGGGTCGAATCTACAAGAAGAAGTTTCTCGAATCGTTCACCGAAGTTTCTGATATCGACGCCATCCTTGAACAAGGGGATGGAGATGAGGAACAGCTGCTCGATCTTCCTGTTCCTCCTCCAACCGCCCGCATCAATCTGGATCCTGCGTCTGGTAGTGTCTTTAATGGTTCGACGCCTGAAGAAATCAAGAAGGAGCAGAGGATTGAAGAGGCTCTGCATGCTAGCAGTCTTCGAGTTCCACGGAGGCCATCATGGAGTGCTGAAATGTCTGCTGACGAGCTTCATGCCAATGAAACACAACATTTCTTAACTTGGCGTCGCAGCTTAGCCAGACTTGAGGAAAATAAGAAGCTTGTCCTTACTCCATTTGAGAAAAATCTTGATATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATTTGATTGTTATGGTTGTTGATTCACGAGATCCATTATTCTATCGCTGTCCTGACCTTGAGGCTTATGTAAAGGAGGTTGATGTGCATAAACGCACATTGCTTTTGGTTAATAAGGCAGATCTTTTACCTGCTTCTGTCAGAGAGAAATGGGCAGAATACTTTCGTGCTCATGATATTCTCTTTATCTTCTGGTCAGCCAAAGCTGCTACTGCAGTTTTGGAAGGCAAAAAACTTGGTTCATCACAGACTGATAACATGGCAAGTGCAAATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTTTAGCCCGCCTGCAATCAGAGGCTGAAGAGATAGTACACAGGAGAAGAAATTCAGGCTCCTCTGGCACAGGGTCATCCACTATTGAATCCTCAGGTGAAAATACTTCTGCTAGTTCATCGTCAAGTCACGTGATTGTGGGATTTGTTGGATATCCTAATGTAGGGAAAAGTTCAACTATCAATGCTCTAGTTGGACAAAAGAAAACCGGTGTCACCTCTACCCCAGGAAAAACAAAGCACTTTCAGACATTAATTATTTCTGAAAAGTTGACACTTTGTGATTGTCCTGGGTTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGATTACTTGTGGGGTGTTGCCAATTGATAGGATGACCGAACACAGGGAGTGTGTCCAAGTTGTCGCCAATAGAGTCCCGAGACATGTCATAGAAGAGATCTATAACATCAGTCTTCCTAAACCTAAGTCATATGAGTCCCAATCCCGCCCCCCTCTAGCATCTGAACTTTTGAGAACATATTGTGCTTCTCGTGGGCAATCTACTTCTAGCGGACTGCCTGACGAAACCAGAGCTTCTCGGCAGATACTGAAAGATTACATTGATGGGAAGCTGCCTCACTATGCAATGCCGCCTAACGTGTCAAATCAAGAATTAGCTTCTGAAGATTCCACTGGACATGACCAAGATAATTCACATGTGTCAGATTCATCTGATATTGAAGATTCTTCAGATGTTGAGACTGAGACTGTACTTACACCAAAACTTGAGCATGTGTTGGACGACCTCAGTTCATTCGACATTGCTAATGGGCTTGCTTCAAACAAAGTTGCAGCTAAGAAGACCAAGGAATCACATAAGCACCACAAAAAGCCGCAGAGGACAAAAGATCGTTCATGGAGAGCCGGGAAAGCAGGGAAGGATGATACAGATGGGATGCCAATTGCAAGATTCCATCAGAAGCCAGTAAATGCAGGTCCTCTGAATGTTTGA 1791 0.4417 MGKNPKNELGRALVKQHNHMIQQTKEKGRIYKKKFLESFTEVSDIDAILEQGDGDEEQLLDLPVPPPTARINLDPASGSVFNGSTPEEIKKEQRIEEALHASSLRVPRRPSWSAEMSADELHANETQHFLTWRRSLARLEENKKLVLTPFEKNLDIWRQLWRVVERSDLIVMVVDSRDPLFYRCPDLEAYVKEVDVHKRTLLLVNKADLLPASVREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGSSQTDNMASANNPDTKIYGRDELLARLQSEAEEIVHRRRNSGSSGTGSSTIESSGENTSASSSSSHVIVGFVGYPNVGKSSTINALVGQKKTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMITCGVLPIDRMTEHRECVQVVANRVPRHVIEEIYNISLPKPKSYESQSRPPLASELLRTYCASRGQSTSSGLPDETRASRQILKDYIDGKLPHYAMPPNVSNQELASEDSTGHDQDNSHVSDSSDIEDSSDVETETVLTPKLEHVLDDLSSFDIANGLASNKVAAKKTKESHKHHKKPQRTKDRSWRAGKAGKDDTDGMPIARFHQKPVNAGPLNV 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02110 596 FunFam Large subunit GTPase 1 156 372 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 489 506 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 473 515 - -
Vivi5g02110 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 387 IPR027417 -
Vivi5g02110 596 CDD HSR1_MMR1 156 371 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 281 309 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 287 309 - -
Vivi5g02110 596 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 567 IPR043358 GO:0003924
Vivi5g02110 596 Gene3D - 156 372 IPR027417 -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 564 581 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 543 596 - -
Vivi5g02110 596 MobiDBLite consensus disorder prediction 547 563 - -
Vivi5g02110 596 Pfam 50S ribosome-binding GTPase 316 372 IPR006073 GO:0005525
Vivi5g02110 596 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 157 371 IPR030378 GO:0005525
Vivi5g02110 596 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
Vivi5g02110 596 PRINTS GTP1/OBG GTP-binding protein family signature 362 377 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02110 Vivi-Chr5 86851141 86855328 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02110 K14539 - gmx:100817523 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02110 5 86851141 86855328 Vivi5g02110 5 86851141 86855328 ECH