Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02103 ATGGAGTTTCCTTCTATTCCCAATCTCTTCCTTCTTCTCTCCTTCTCAATCCTCTTCCTTTCATCTCTTCACGTTCAAGCTAAAGTTACTTTCAAGTATTGCGATAAGAAGGAAGATTATCCTGTCAAGGTGACTGGAGTTGAAATATTACCAAACCCTGTGGTCAGTGGAAACCCAGCCAATTTCAAGATCTCAGCTACCTCTGGTAAGGCTCTTTATGGTGGAGATGTGGTAATTGGAGTTTCCTATGTTGGTGTGCCTGTCCATTCTGAAACCATTGATCTATGTCAGGAAGTATCTTGTCCCGTTGCTAATGGAAATTTTGTGATTTCTCACACCCAAACACTGCCTTCAATTACTCCACCGGGACCTTATGCTCTCAAGATGACTCTGAAGGACGACAAGGGCGATCTGTTAACTTGCATCAAGTTTAATTTTAAAATCGTTTTCGGATCTCTCGTGTCTGACGTGTGA 474 0.4219 MEFPSIPNLFLLLSFSILFLSSLHVQAKVTFKYCDKKEDYPVKVTGVEILPNPVVSGNPANFKISATSGKALYGGDVVIGVSYVGVPVHSETIDLCQEVSCPVANGNFVISHTQTLPSITPPGPYALKMTLKDDKGDLLTCIKFNFKIVFGSLVSDV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02103 157 SMART pgtp_13 31 146 IPR003172 -
Vivi5g02103 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Vivi5g02103 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 9 149 IPR039670 GO:0015918|GO:0032934
Vivi5g02103 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Vivi5g02103 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Vivi5g02103 157 Gene3D - 27 151 - -
Vivi5g02103 157 Pfam ML domain 29 148 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02103 Vivi-Chr5 86366795 86369591 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02103 - - gmx:100500637 234.187