Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02005 ATGGCCAATCCAAACCCTGTCCTTCCTTTGTATGAAAAAAATTGGTACAAACACAATTATAAAAGAGTATTGGATAGCATAATTTTAATCCTTCTTTTGTTGCTGCTTGGTTACCGTTTTATATCTGTCAACCACTATTCCCTTCCTTGGTTTGTTGCTTTCATGTGTGAATCTTGGTTCACCCTAGGTTGGATTTTCACCATGTCCACTCAATGGACTCCCGCTCTTGTCAAAACCTACCCACAACGTCTCCTACAAAGCGTAGAAGAACTTCCAGCAGTAGATTTATTTGTGACAACAGCAGACGACGAGTTAGAACCACCAATCATCACAGTAAACACAGTCCTATCACTATTATCACTCGACTATCCATCTCACAAACTATCTTGTTACGTTTCCGATGATGCATGTTCTCCTCTAATCTTCTACGCTCTTCAACAAGCTTCAAATTTCGCTAAACATTGGGTCCCTTTTTGTAAAAAATACAACATACAAATTCGAGCTCCATTTCGTTACTTCAATGATGACAACGACACCACAAATAATGAAGAATTCAGACAAGAGTGGCTACAGATGAAGGATATGTATGAGCATCTTTGCCGTGAAATTGATGTGGACCCAAAATCGATTCCAAACTTACTTGAAGGAGAATTTGCAGTTTTCTCAAATACAAATAAGACAAATCATCCGGCTATTATCAAGGTTATATGGGAGAACGAGGAAATGGTTGAAGATGGATTGCCACATCTGATCTACTTATCTAGAGAGAAGAGGCCAAAGCAGCCTCATCATTTCAAAGCCGGTGCCATGAATGTCTTGACAAGAGTCTCTAGCTTAATTACCAATGCACCTTTCATGTTGAACGTCGATTGTGACATGTTTGTAAACAATCCAAAGATTGTTCAACATGCGATGTGCATTTTGCTTGATTCAAAAGGAGAAAAAGAAGTTGCTTTTGTACAATGTCCTCAACAATTCTACGCTACACTTAAAGACGATCCTTTTGGAAATCAGATGACTATTTTGTATAAGTATCTTGGAGCTGGATTAGCAGGACTCCAAGGCATGTTCTACGGTGGAACGAACTGTTTTCATAGAAGAAAAGTTATATACGGTCTTTCTCCTGATGACATGGAAAATGGATCAAACCAATTATTAGAGGAGGAGCTAAAACAAAAATTCGGAGCTTCCAACGAACTTACGAAATCAATTGTTCATGCTTTGGAAGGGAGGACACATTCACCTGGTGACATCAATGTTAAAAAAGCAGTTGAAGAAGCTACTAAAGTTGCTTGTTATGGATATGAATATGAAACTACTTGGGGTAAACAGGTCGGTTGGATGTATGGATCAATAACAGAAGATGTCTTAACTGGACTAACAATACACGAAAAAGGTTGGAAATCAGAATTATGTACACCAGATCCAATTGCTTTCACAGGATGCGCTCCAAGTGATAACCCAACAAGTATGTCACAATATAAAAGATGGGCCACAGGAATGCTTGAAATATTCTTTAGCAAGCATTGTCCTATTCTTGGTACCATTTTTGCTAAACTTTCTTTTAGGGAATTCTTAGCTTATATGTGGATCGTTAATTGGGGCTTCAACCCATTTGCTCAAGTATGCTACTCATGTCTAATTGCTTATTGCATCATTACCAAATCTTACTTCTTGCCAAAGGATCAAGGCATTTATATTCCTATAACACTAGTTGTGATTTACAATGTATATACTCTATATGAATATTTAGCTTCAGGGCTGTCAATAAGAGAATGGTGGAACAATGAAAGAATGTCAAGAATAACACCTATGAATGCTGGATTATGTGGATTTATTACTATGTTACTAAAATTATTGGGAGTATCCAACACTGTTTTTGACATAACAAAGAAAGATCTTCCCCCGTTTAGCGAAGATACACAAGATAAGAATGCTGGTAGATACACGTTTGATGAGTCATTGGTTTTCTTGCCGGGAACAACTACCTTGTTGTTGCAATTAACAGCAATACTTATCAAGCTTTTGGGGCTTCAAAAACAAGTAATAAGAGGGGATTATGAGTGTGGAATGGTTGAAATGTTGTGTAGTGTGTATTTGATCATATGTTACTGGCCATTTCTTAGAGGATTGTTTGAGACAGGAAAATATGGGATTCCTTTGACTACAATATGCAAAGGAGGAACTTTGACATGCTTGTTTGTCTTTCTTTGTAGAAGGACAGTTTCTAGTTGA 2235 0.3749 MANPNPVLPLYEKNWYKHNYKRVLDSIILILLLLLLGYRFISVNHYSLPWFVAFMCESWFTLGWIFTMSTQWTPALVKTYPQRLLQSVEELPAVDLFVTTADDELEPPIITVNTVLSLLSLDYPSHKLSCYVSDDACSPLIFYALQQASNFAKHWVPFCKKYNIQIRAPFRYFNDDNDTTNNEEFRQEWLQMKDMYEHLCREIDVDPKSIPNLLEGEFAVFSNTNKTNHPAIIKVIWENEEMVEDGLPHLIYLSREKRPKQPHHFKAGAMNVLTRVSSLITNAPFMLNVDCDMFVNNPKIVQHAMCILLDSKGEKEVAFVQCPQQFYATLKDDPFGNQMTILYKYLGAGLAGLQGMFYGGTNCFHRRKVIYGLSPDDMENGSNQLLEEELKQKFGASNELTKSIVHALEGRTHSPGDINVKKAVEEATKVACYGYEYETTWGKQVGWMYGSITEDVLTGLTIHEKGWKSELCTPDPIAFTGCAPSDNPTSMSQYKRWATGMLEIFFSKHCPILGTIFAKLSFREFLAYMWIVNWGFNPFAQVCYSCLIAYCIITKSYFLPKDQGIYIPITLVVIYNVYTLYEYLASGLSIREWWNNERMSRITPMNAGLCGFITMLLKLLGVSNTVFDITKKDLPPFSEDTQDKNAGRYTFDESLVFLPGTTTLLLQLTAILIKLLGLQKQVIRGDYECGMVEMLCSVYLIICYWPFLRGLFETGKYGIPLTTICKGGTLTCLFVFLCRRTVSS 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02005 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 377 IPR029044 -
Vivi5g02005 744 Pfam Cellulose synthase 94 381 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi5g02005 744 Pfam Cellulose synthase 383 714 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi5g02005 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 109 585 IPR029044 -
Vivi5g02005 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 11 720 - -
Vivi5g02005 744 FunFam Cellulose synthase-like protein H1 220 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02005 Vivi-Chr5 78436236 78443784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02005 1 735 Glycosyltransferase AT2G32530 44.342 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02005 - - cam:101488214 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02005 5 78436236 78443784 Vivi5g02005 5 78436236 78443784 ECH