Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01978 ATGAATGACACTGAAAAAAAACCACATCACTCCCAAATAGAACTACAAATAAATCTTCATCCTCATCATCTTCCAATCACAAAAAATGAACCCAACCTCAAAAACCAATCTTCACTATCAACAATCCTAACACAAATCCATGCAGGCTATTTCAGAATCAGTCTCTCCCTCTCAATCCAGTCCTTACTATGGAAAATCCTAATAGAACCAATCAAAGATGCACATTTTCTTAGACATATATTCACAATAATACCCTCCACAGCTCTCACTCTTTTATGGTCACTTTCCTTATTCACACTATTAACCCTCTCTTTTCTCTATCTTCTCAAATGTTTCTTCCACTTTGACAAAGTGAAAGATGAATTCTCAAACCAAATAGGCGTAAACTACATGTTTGCTCCATGGATTTCATGGCTACTTTTGTTAGAATCCTCACCTTTTGTACCACCTGCAGCACTTCATTACAAAATTCTCTGGTTATTTTTTGTTGCTCCTATAGTGATCCTTGATGTTAAGATTTATGGCCAGTGGTTTACCAAAGGGAAGATGTATTTGTCGATGGTTGCGAATCCGACGAGTCAGATGTCTGTTATTGGTAACCTTGTTGCGGCACATGCTTCGGGGGTGATGGGATGGAAGGAGAGTGGTATATGTTTTTTCTCTCTTGGTATTGCGCATTATTTGGTGCTTTTTGTGACGTTGTATCAGAGGTTGCCGGGGAATAACAAGATTCCGGCGATGTTGCGGCCGGTGTTCTTCTTGTTCTTTGCTGCTCCAAGTGTTGCTAGTTTGGCTTGGCACTCGGTTTCTGGGAGCTTTGATACTGCTTCTAAGATGCTGTTCTTTCTCTCCCTCTTCCTTTTCTTGTCCCTGGTTTCAAGGCCTTTGTTATTCAAGAAGTCCATGAAGAAATTCAGTGTGGCATGGTGGGCTTATTCTTTTCCCCTAACAGCATTGACACTAGCTTCAGCACAATATGCTCATGAAGTTAAGGGAATAATGGCTCATGTTATTATGTCAGTCTTATCATTAATCTCAGTTTTGGTGTGTCTTGTGTTAATGATTGTATCTGCTCTCAACATTAGGGTGCCTTTTAAAGCACACAAGCATATTTCAAAACAGACAAATGACATTGCTGTAATTTGA 1146 0.3953 MNDTEKKPHHSQIELQINLHPHHLPITKNEPNLKNQSSLSTILTQIHAGYFRISLSLSIQSLLWKILIEPIKDAHFLRHIFTIIPSTALTLLWSLSLFTLLTLSFLYLLKCFFHFDKVKDEFSNQIGVNYMFAPWISWLLLLESSPFVPPAALHYKILWLFFVAPIVILDVKIYGQWFTKGKMYLSMVANPTSQMSVIGNLVAAHASGVMGWKESGICFFSLGIAHYLVLFVTLYQRLPGNNKIPAMLRPVFFLFFAAPSVASLAWHSVSGSFDTASKMLFFLSLFLFLSLVSRPLLFKKSMKKFSVAWWAYSFPLTALTLASAQYAHEVKGIMAHVIMSVLSLISVLVCLVLMIVSALNIRVPFKAHKHISKQTNDIAVI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01978 381 FunFam S-type anion channel SLAH1 40 365 - -
Vivi5g01978 381 Pfam Voltage-dependent anion channel 46 355 IPR004695 GO:0016020|GO:0055085
Vivi5g01978 381 CDD TDT_SLAC1_like 110 355 - -
Vivi5g01978 381 PANTHER S-TYPE ANION CHANNEL SLAH3 30 371 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vivi5g01978 381 Gene3D - 40 363 IPR038665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01978 Vivi-Chr5 76736210 76739494 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01978 K26672 - gmx:100794114 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01978 5 76736210 76739494 Vivi5g01978 5 76736210 76739494 ECH