Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01972 ATGGCAATAATTTCTAACAAAATCATCTCATTCACAATACTACTTTTCATAACCATCAGCACAACTAATGGTCAAGCTCAACCAAATCAATCAACCTTGGTGTTCTACCTACAAGATGTCGGAAAAGGACCTAAGGCAACTGTTTCACCGGTTATAGGCATCAATGGCAAGGTTTGGTCCTATAACTCATTTGGAACAATATTTGTTGTTGATGATCCTGTTACAATAAGTCCTAGCTCATATTCAACTCAAATTGGACGGGCTCAAGGTACAATTACGGTAACTGCTCAAGATGGTGCAAATGTGAACATAGTTTTGTCACTTGTGTTCAACAATGCGCAATACGCTGGTAGCACTTTAGAAATTAAAGGTACAAGTCGACAGCGTGATAACTTAAGAGAGCTTGGTGTTGTTTCTGGAACTGGAAGGTTTCGATTTGCAAGGGGATTTGCTGTGTTTGAAACTATATCTTATGATCCTACCTATAGTCAATCTGTTATTAGGTTGACTGTAACCTTGGCAATACCTTGA 531 0.3861 MAIISNKIISFTILLFITISTTNGQAQPNQSTLVFYLQDVGKGPKATVSPVIGINGKVWSYNSFGTIFVVDDPVTISPSSYSTQIGRAQGTITVTAQDGANVNIVLSLVFNNAQYAGSTLEIKGTSRQRDNLRELGVVSGTGRFRFARGFAVFETISYDPTYSQSVIRLTVTLAIP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01972 176 Gene3D - 16 174 IPR044859 -
Vivi5g01972 176 PANTHER NUCLEOPORIN-RELATED 24 171 IPR004265 -
Vivi5g01972 176 Pfam Dirigent-like protein 32 173 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01972 Vivi-Chr5 76471620 76472377 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01972 - - vvo:131640567 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01972 5 76471620 76472377 Vivi5g01972 5 76471620 76472377 ECH