Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01938 ATGTCTTATCTCCTCCGATCAAGCAAATCTAAGCTATTATCTTCCTCTTCTTCTCTTTCTAGAGCCTTCTCTTCCATCCCCCGCTCCAACAACCAGATCGGATCCATCTCTCCCGCCGCCACCGAACTCTTTCAACGCAACTCTGCTACTCTCCCCACCGCGGAAGAAAACCCTACCAAGGGATACACGCCTGGTTTCCCCCCAAATCCGGAGAGTAAGCTTGGTGGCGATTCTAATGTCATCAATTCTTTGAGATACCAGGCTCTTGGACTGGAGACTAATGTACTGGCTGGAGCTAGATATGGCACTAAAGCTTGTGCTGCCAAGAGTCCAATGCTATTGGGAGTCAGTACTCTGATGGCAAGAAACTTTGAGAGAAGCATGGCTGCTGACACGTTGGGACTGGCTGGTCAGAGACGTTTTATGAGTGACATCCCAAGTAAAACCAGTGAGATAAAACCACCTTCCGGTTTTCGCCCGTTATCTCCTCATCTTCCTCTTTATCAGCCCCAGCTTTCTTCAACTCTTTCAATTTGCAATAGAATCGCCGGAGCTTTCCTAGCAGCTGTCACCTTGCTTTTTTATATGATATACATGAAATTGGGTTTGGTTACTCTCACCTATGATTCATTCTACCAGTTTGTATTCTATTCATCAAAACTCCACCTACTCGCAGTTGAGATTTCTGCCTTAGCCATGTCCTATCATCTGTATAGTACAATTCGTCACTTATTTCTATGA 741 0.4548 MSYLLRSSKSKLLSSSSSLSRAFSSIPRSNNQIGSISPAATELFQRNSATLPTAEENPTKGYTPGFPPNPESKLGGDSNVINSLRYQALGLETNVLAGARYGTKACAAKSPMLLGVSTLMARNFERSMAADTLGLAGQRRFMSDIPSKTSEIKPPSGFRPLSPHLPLYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKLGLVTLTYDSFYQFVFYSSKLHLLAVEISALAMSYHLYSTIRHLFL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01938 246 MobiDBLite consensus disorder prediction 51 77 - -
Vivi5g01938 246 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 152 246 IPR034804 GO:0016020
Vivi5g01938 246 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 143 245 - -
Vivi5g01938 246 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 159 246 IPR000701 GO:0016627
Vivi5g01938 246 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 120 245 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Vivi5g01938 246 CDD SQR_TypeC_SdhC 159 246 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Vivi5g01938 246 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 155 245 IPR034804 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01938 Vivi-Chr5 74308402 74311739 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01938 K00236 - gmx:100527396 302.367