Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01915 ATGTCCGAGTTCCGTCGCAAATCGGGTGGTCACTATTCGCTGCTCCGCTGCCGGATTCATAGCCGCGTGTCGTTGCTCCAGCGATGCATCCTCCGTGCTCTTCACCGCTTCCTCGCTTGCTCCGGAGCGAAGCCAGGTGCTAATGCTAATTACAGCATGTTGACGCCACATGCAGCATTGCCGTCTACGTCTCCGCCTCCACCGTTGGAATCGGCTGCCGAATCTGGCCCGGCGCCGGTTTTTCATACAAATGATTTGGATACTGATTTGGTTAATCTTAAAATTAGTTTGTTGGGGGATTGCCAAATCGGAAAAACCAGCTTTTTGGTGAAATATGTGGGAAATGAAAAGGAGCAGGGAGGGGAAGAGAGGAAAGGACCAAATCAGATGGACAAAACAATGGTTGTGAGTGGAGCACGTATATCCTATTGTATCTGGGAAGTTCAAGGGGATGGAAAATCGCAAGACCAGCTACCAATGGCATGTAAGGACTCGGTGGCAATTTTAATCATGTTTGATCTAACTAGTCGATGCACATTAAACAGTGTTGTAGGATGGTACAAGGAAGCAAGAAAATGGAATCAGACTGCAATACCAGTGTTGATAGGAACAAAATTTGATGATTTCATTCAGCTACCTATTGATATGCAATGGACAATCGCTAGTGAGGCAAGAACATATGCAAAGGCATTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAACGTGAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTTGACTTACCATGGACAGTTGAAAGGAACCTAAATGTTGGAGAACCCATCATTGATTTCTGA 834 0.4508 MSEFRRKSGGHYSLLRCRIHSRVSLLQRCILRALHRFLACSGAKPGANANYSMLTPHAALPSTSPPPPLESAAESGPAPVFHTNDLDTDLVNLKISLLGDCQIGKTSFLVKYVGNEKEQGGEERKGPNQMDKTMVVSGARISYCIWEVQGDGKSQDQLPMACKDSVAILIMFDLTSRCTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01915 277 SMART rho_sub_3 95 259 IPR001806 GO:0003924|GO:0005525
Vivi5g01915 277 Gene3D - 84 268 IPR027417 -
Vivi5g01915 277 FunFam Septum-promoting GTP-binding protein 1 83 267 - -
Vivi5g01915 277 Pfam Ras family 94 257 IPR001806 GO:0003924|GO:0005525
Vivi5g01915 277 PRINTS Transforming protein P21 ras signature 93 114 - -
Vivi5g01915 277 PRINTS Transforming protein P21 ras signature 195 208 - -
Vivi5g01915 277 PRINTS Transforming protein P21 ras signature 235 257 - -
Vivi5g01915 277 PRINTS Transforming protein P21 ras signature 134 156 - -
Vivi5g01915 277 ProSiteProfiles small GTPase Rab1 family profile. 87 277 - -
Vivi5g01915 277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 270 IPR027417 -
Vivi5g01915 277 PANTHER - 90 267 - -
Vivi5g01915 277 SMART rab_sub_5 93 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01915 Vivi-Chr5 73198987 73202107 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01915 K07976 - gmx:100780638 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01915 5 73198987 73202107 Vivi5g01915 5 73198987 73202107 ECH