Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01894 ATGGCCTCTTCAATTTTTGTGCCTTCTTCGATAGAGGAAGAGGAAGCAAGATTCGAATCCGAAGTAGCAGAGGTGCAAGCATGGTGGAACTCAGAGAGATTCAAACTAACCAAAAGACCATACTCAGCTAAAGACGTAGTTTCCTTAAGAGGAAACCTAAGACAAACCTATGCCTCAAACGAGTTATCCAAAAAGCTATGGAACCTTCTCAAAACTCACCAAACCAACAGAACAGCATCAAGAACATTTGGTGCACTTGATCCAGTTCAAGTCACACAAATGGCAAAACATTTAGACACGATTTACGTCTCCGGCTGGCAGTGTTCATCCACACACACATCAACAAACGAACCCGGTCCTGATCTTGCTGATTATCCTTACGACACTGTCCCGAACAAAGTTGAACATCTTTTCTTTGCTCAGCAGTATCATGACAGAAAACAAAGAGAAGAGAGAATGAGTATGAGACGAGAAGATCGAGCACGGACACCTTTTGTTGATTATTTGAGACCAATTATAGCTGATGGCGATACTGGCTTCGGCGGCACAACAGCAACTGTTAAGCTTTGTAAGCTTTTCGTGGAACGCGGTGCTGCGGGTGTTCATATCGAGGATCAGTCTTCTGTGACGAAGAAATGCGGTCACATGGCCGGGAAAGTGCTGGTTGCGGTTAGTGAGCATATTAACAGGCTTGTTGCTGCTAGGCTTCAGTTTGATGTTATGGGGGTTGAAACTGTCTTGATTGCTAGAACGGATGCTGTTGCTGCTAATCTTATTCAATCGAATATCGATACAAGGGATCATCAGTTTATCTTGGGCGTGACGAATCCGAATATGAAGTGGAAGAGTTTAGTGACAGTTATGGCAAAAGGATTCGCGGCTGGCAAGAGTGGAGCCGAGCTTCAGGCATTAGAGGATCATTGGTTGTCGAAGGCGGAATTAAAGACTTTCTCTGAAGCAGTAGAGGATGCAATTAAGAATAAAAAATGTAACGAGGACGAGAAAATGAGGAAGTTGAACGAGTGGAAGCATTTTTCAAGTTACGAAAAGTGCCTTTCAATTGAGGAAGGAAGGGAAATTGCTGAGAGATTAGGTGTGAGGAGCTTGTTTTGGGATTGGGACTTGCCTAGAACAAGAGAAGGGTTTTACAGGTTTAAAGGTTCTGTTACAGCGGCTATTGTTCGCGGTTGTGCTTTCGCGCCACACGCAGATCTTATATGGATGGAAACAGCGAGTCCGAATGTGGCTGAATGCACACAGTTTGCTGAAGGGGTGAGATCTAAGCATCCAGAGATGATGCTTGGTTACAATCTTTCGCCGTCGTTTAATTGGGATGCGTCCGGCATGAGTGATGTGGAAATGAGAGATTTCATTCCTAAGATTGCTAAGTTAGGATATGTTTGGCAATTTATAACTGTTGGTGGTTTGCATTGTAATGCATTAATCAGTTCTACTTTTGCTAAGGATTTTGCTAGCAGGGGAATGTTGGCTTATGTAGAAAGGATTCAAAGAGAGGAAAGGAAAAATGGTGTTGATACACTTGCTCATCAGAAATGGGCTGGTGCTAATTACTATGATAGGTACCTCAAAACTGTCCAAGGAGGTGTTGCCTCAACGGCCGCAATGGGGAAAGGAGTGACTGAAGAGCAATTTAAGGAAACATGGACTAGGCCAGGAGCAGTGGGAATTAATGGAGGCAATGGCAGCACGGTGGTTGCTAAGGCCAGAATGTGA 1734 0.4406 MASSIFVPSSIEEEEARFESEVAEVQAWWNSERFKLTKRPYSAKDVVSLRGNLRQTYASNELSKKLWNLLKTHQTNRTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREERMSMRREDRARTPFVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDVMGVETVLIARTDAVAANLIQSNIDTRDHQFILGVTNPNMKWKSLVTVMAKGFAAGKSGAELQALEDHWLSKAELKTFSEAVEDAIKNKKCNEDEKMRKLNEWKHFSSYEKCLSIEEGREIAERLGVRSLFWDWDLPRTREGFYRFKGSVTAAIVRGCAFAPHADLIWMETASPNVAECTQFAEGVRSKHPEMMLGYNLSPSFNWDASGMSDVEMRDFIPKIAKLGYVWQFITVGGLHCNALISSTFAKDFASRGMLAYVERIQREERKNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKETWTRPGAVGINGGNGSTVVAKARM 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01894 577 PIRSF ICL 370 554 IPR006254 GO:0004451|GO:0019752
Vivi5g01894 577 PIRSF ICL 12 347 IPR006254 GO:0004451|GO:0019752
Vivi5g01894 577 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 11 535 IPR015813 GO:0003824
Vivi5g01894 577 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 12 556 IPR006254 GO:0004451|GO:0019752
Vivi5g01894 577 Pfam Isocitrate lyase family 21 551 IPR006254 GO:0004451|GO:0019752
Vivi5g01894 577 Gene3D - 262 377 - -
Vivi5g01894 577 NCBIfam isocitrate lyase 22 551 IPR006254 GO:0004451|GO:0019752
Vivi5g01894 577 Gene3D - 17 535 IPR040442 -
Vivi5g01894 577 CDD ICL_PEPM 66 257 IPR039556 GO:0003824
Vivi5g01894 577 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
Vivi5g01894 577 FunFam Isocitrate lyase 262 377 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01894 K01637 - gmx:100782793 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01894 5 71658557 71660957 Vivi5g01894 5 71658557 71660957 ECH