Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01848 ATGCAGTTATTTCAGAAACACACAAAAGCACAATTTTTGATTAATTTTATATTAGTGGCATCTTCATTTTGTGGCTTTTATGTCATTGTATCAGTCCTAATATTAGGTGCTTCAAATCAAAATCTATTAGTACATTTACAACATTCTTCATCAGAAGATGGGCCAGAGACCGCAACCGCACCTGCAACCGCAATCACTAACACAAGTCTAGATCATATAGTATTTGGAATTGCGGCAAGCAAAAGTTCGTGGACAAAGAGAAAAGAGTATGTCAAACTATGGTGGAAAAACAACAATACAATGAAGGGCTGTGTTTTCTTGGATAGTCTACCTAAAAATAATGAAGACCCTTCTCTTCCTCCTTTATGTCTCTCTCAAGACACGTCGCGGTTTCGATACACTTGCAGCGGGGGGCTTCGATCAGCAATACGAGTGGCGCGCGTTGTTGTGGAGACGGTGGCCTTGAATCATACGGGTGTCAAGTGGTATGTGTTTGGAGACGACGACACGGTTTTCTTCCCGGAGAATTTGGTGAAGACTTTATCTAAATATGATCATGAGCTTTGGTATTATATTGGTGCGAATTCGGAGATTTATGAGCAAAATCGTTTGTTTGGGTTTGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATTAGTTCTTCTCTGGCTAAGGTTTTGGCTAAAGTTTTTGATTCTTGTTTGGAAAGGTATCCTCATCTCTATGGAAGTGATGGCAGGATTCACTCTTGTTTAGCTGAACTTGGGGTTGGATTGACACATGAACCAGGCTTTCATCAGGTTGATTTAACAGGAAACACCTTTGGCCTATTAGCAGCACATCCGGTAACTCCTTTAGTATCTCTACACCACTCAGATTACACAGATCCAATCTTTCCAAAAATGTCAAGAACACAAGCTCTCCAACATTTATTCAAAGCAGTAAATGTTGATTCTCAAAGAATCCTGCAACAAACAGTTTGCTATAACAAAAAGTTTTCATGGACAGTTTCGGTATCATGGGGTTATGCCGTTCAAATATTCACAGACCATATGTTTTTACCAGAAGCTGTTAACGTGCAAGAAACATTCAAACAATGGAAAAATGGAAATGTGTTAGCAAAAACTTATATGTTCAATACAAAACCATTTGACTCTAATCCTTGTGAAAGACCCACCATTTTTTATCTTGATAGTGTTTCTTCTGGCAAGAATGGTGTCATAACCAGTTATTATAAGAGATTTTTACGAGATTGCCGAAAGGAACGGGGCTCGCCGAACAAACTAGAAGTTATCAAAGTGGTCTCTAATAAGCTAGACCTTAACATCAAACAGTTGCAGGCTCCAAGAAGGCAATGTTGTGATATATTGCCATCAAGTGCTGGTGACAAACTGGACATTGCTGTTAGAGAATGCAAAGATGGTGAATTGATTTATATGCACTGA 1443 0.3915 MQLFQKHTKAQFLINFILVASSFCGFYVIVSVLILGASNQNLLVHLQHSSSEDGPETATAPATAITNTSLDHIVFGIAASKSSWTKRKEYVKLWWKNNNTMKGCVFLDSLPKNNEDPSLPPLCLSQDTSRFRYTCSGGLRSAIRVARVVVETVALNHTGVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGANSEIYEQNRLFGFGMAFGGAGFAISSSLAKVLAKVFDSCLERYPHLYGSDGRIHSCLAELGVGLTHEPGFHQVDLTGNTFGLLAAHPVTPLVSLHHSDYTDPIFPKMSRTQALQHLFKAVNVDSQRILQQTVCYNKKFSWTVSVSWGYAVQIFTDHMFLPEAVNVQETFKQWKNGNVLAKTYMFNTKPFDSNPCERPTIFYLDSVSSGKNGVITSYYKRFLRDCRKERGSPNKLEVIKVVSNKLDLNIKQLQAPRRQCCDILPSSAGDKLDIAVRECKDGELIYMH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01848 480 PANTHER FRINGE-RELATED 18 477 - -
Vivi5g01848 480 FunFam Fringe-related protein-like 60 315 - -
Vivi5g01848 480 Pfam Protein of unknown function, DUF604 201 453 IPR006740 -
Vivi5g01848 480 Gene3D - 61 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01848 Vivi-Chr5 69038527 69041533 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01848 57 480 Glycosyltransferase AT4G15240 52.471 8.31e-158 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01848 - - vvo:131632357 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01848 5 69038527 69041533 Vivi5g01848 5 69038527 69041533 ECH
Vivi5g01848 5 69038527 69041533 Vivi2g06798 2 207173485 207175195 PCT