Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01830 ATGTTGCTAAATTCATCTTTTGTTTCACTTCCTACTTTCTTCAAACCTCAACAACTACAAAGAACTAATCTTCCTAGTTCAAATGGCTCTCTCCTTCGATGTTATGCTACTAGTTCAAATATTTCTCAAAGAAAATCTGCCAATTACAAACCCAATATTTGGAATCACGATACTTTATTATCCTTAAAGCACAGTTATGCGGATGTCAAGTACGTGAATAGGAGCAGGAGTTTGCAAGAGGAAGTAAGAAGAATGATTAATGAAGAAAATGAAGAAATCTTAGAGTTAATAGAAAATGTGAAACGCTTAGGCCTCAGCTACCACTTTGAAAAGGAGATAAAAGAAGCACTTGATAGATTCTTGTCTTTGGAAAAATACAGTGATACGGTTATTGAAAAAGATCTGCATGAAACTGCTTTAAAATTCAAACTCCTCAGAGAATATGGATATGATGTTTCTCCAGATATTTTTGAGAGGTTTAAGGACCAAAGTGGAAATTTTAAGACATGCCTTGTCAAAGATATTAAAGGAATGTTGAGCCTCTACGACGCATCATTTTTGTCTTATGAAGGAGAACTAATTTTAGATGAAGCAAATTCCTTCTCGAGCTTCCACCTCAAACAAGGACTTCATGATGATATAAGTGATTTTCTTATTGAACAAGTGAATCATTCATTGGAACTTCCACTGCATCGTAGATTTCAAAGACTTGAAGCTAGATGGTATATTGAGTTATATGGAAAAACAAAGGATGCTAATAACGTGTTGCTTGAAGCTGCCAAGTTGGATTTCAACATTGTGCAATCAAATCTACAACTAGATCTTATAGAAATGTCAACGTGGTGGAAGGGAATGGGACTATCTCCAAGGTTAAGATTTGGTCGCGACAGGCTAATGGAATGCTTTTTTTGGGCTGCTGGAATGGCACCATTGGAGCCCAAATTCAGTGACCTCCGTAAAGGATTAACTAAAGTATGCTCTTTAATAACTTTAATCGATGACATATATGATGTTTATGGCACTTTGGATGAATTAGAGCTTTTCACAACAGCAGTAGAAAGTTGGGATATTAATGCAGTTAAAACTCTTCCAAAGTACATGAAGATATTCTTTTTAGCACTCTACAACACTATCAATGGATTAGCATATGATGCATTTAAAGAAAATGGATATGACATCCTTCCCTACCTCGTCAAAGCGTGGTCTAATATGTTGAAAGCATTCCTACAAGAAGCAAGATGGTGTGATGATGAACATATGCCAAAATTTGATGAATACCTCAACAACGCATGGATGTCTGTATCTGGTGTTGTTTTACTAACCCATACCTATTTTCTACTAAATCATACCATAACGAAGGAAGGGCTTGAACACTTGGAAAATTGCCACTTGTTATTTCAGAGACCCTGCATTATTTTTCGACTTTGCAATGATTTAGCTACTTCATCGGCGGAGTTACAAAGAGGTGAAGCAACTAATTCAAGTATGTGCTACATGAAGGAATATGGTGTTAATGAGATGGTTGCTCACAAATACATCCATAATTTTCTTAATGAAACTTGGAAGAAGATGAACAAAGATCGAGTTACATATTCAACTCTCCCAAAATATTTTCTAGAAACATTAACTAACCTTGCTAGAATTTCTCATTGCACGTATCAATATGGAGATGGGCATGGAGCTCTTGATACCATTTCACAAAATCGACTAAAGGCATTAATACTTGAACCCATTAATTAA 1740 0.3557 MLLNSSFVSLPTFFKPQQLQRTNLPSSNGSLLRCYATSSNISQRKSANYKPNIWNHDTLLSLKHSYADVKYVNRSRSLQEEVRRMINEENEEILELIENVKRLGLSYHFEKEIKEALDRFLSLEKYSDTVIEKDLHETALKFKLLREYGYDVSPDIFERFKDQSGNFKTCLVKDIKGMLSLYDASFLSYEGELILDEANSFSSFHLKQGLHDDISDFLIEQVNHSLELPLHRRFQRLEARWYIELYGKTKDANNVLLEAAKLDFNIVQSNLQLDLIEMSTWWKGMGLSPRLRFGRDRLMECFFWAAGMAPLEPKFSDLRKGLTKVCSLITLIDDIYDVYGTLDELELFTTAVESWDINAVKTLPKYMKIFFLALYNTINGLAYDAFKENGYDILPYLVKAWSNMLKAFLQEARWCDDEHMPKFDEYLNNAWMSVSGVVLLTHTYFLLNHTITKEGLEHLENCHLLFQRPCIIFRLCNDLATSSAELQRGEATNSSMCYMKEYGVNEMVAHKYIHNFLNETWKKMNKDRVTYSTLPKYFLETLTNLARISHCTYQYGDGHGALDTISQNRLKALILEPIN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01830 579 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 50 251 IPR008930 -
Vivi5g01830 579 Coils Coil 79 103 - -
Vivi5g01830 579 SFLD Isoprenoid Synthase Type I 253 578 - -
Vivi5g01830 579 Pfam Terpene synthase, N-terminal domain 53 226 IPR001906 GO:0010333|GO:0016829
Vivi5g01830 579 CDD Terpene_cyclase_plant_C1 44 577 IPR044814 GO:0010333|GO:0016102
Vivi5g01830 579 Gene3D Farnesyl Diphosphate Synthase 51 564 IPR008949 -
Vivi5g01830 579 SUPERFAMILY Terpenoid synthases 253 578 IPR008949 -
Vivi5g01830 579 Gene3D - 91 252 IPR036965 GO:0010333|GO:0016829
Vivi5g01830 579 FunFam Isoprene synthase, chloroplastic 215 568 - -
Vivi5g01830 579 PANTHER OS04G0344100 PROTEIN-RELATED 43 559 - -
Vivi5g01830 579 Pfam Terpene synthase family, metal binding domain 257 523 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi5g01830 579 FunFam Isoprene synthase, chloroplastic 88 252 - -
Vivi5g01830 579 SFLD Terpene Cyclase Like 1 C Terminal Domain 253 578 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01830 Vivi-Chr5 67760730 67766523 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01830 K12742 K19968 mtr:25492046 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01830 5 67760730 67766523 Vivi5g01830 5 67760730 67766523 ECH