Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01826 ATGTTTACCTTCATTCTCAATTTATTGTCTATAACAACTCCAATCAATTATTTTTTTGGTTTTTGTGCTTTAATTCTCTGCATTTTTTCCTATTTTTATACCTATAGTGTTTCCATGTTATTGACTATTATTACTCAGTATTCAAGAAAATTGGCTAAAGTGTTTGGAAAATCAAGTGGTTCTAGTGGAAAGCTTAAGGTAATATTCCATGATTTTCCGGGAGGCGCGGAAGGTTTCGAGCTTATGTTAAGATTCTGTTATAACAATGGAAATGCTGAGTTGAATCCTTCGAATCTGTTACTCGCGCGTTGTGGTGCTGAATATATGGAGATGAATGAATCTGTCAAAAGTGGTTCTAATTTATGTGATCAAACTGAGAAATTGCTTCGAGGGATTGGTTATTGGTCGTGGTCGGAGATTTTGACTGCTTTGAAGCAATGTCAGAGTTTACTAGTTGAGGATTCTTCTGTGATGGTAGAGAGGTGTTTGGAAGCTGTGGTTGGGAGGTTGGTTTTGGCTAGTGAAGCAAGCCCGTGTCCTTCGAGTTGCTCTAATGATAGTTCAGGGGTTCGGTTTTCGTGTGACTCGAAAAGTACTGAGAGTATTAAGACGAGTTTCGCTCGTTCGACGTGGTGGTTTGAGGATCTCTTGTTTTTGACTCCCCCGATGGTTTTTGTGTTGGTAAAAGCGATGCTTTCGAGTAAGTTGGATCATCATGTTATCAGCAGGTTTCTTCTCTTTTATCAGAAGGCGAAATTCACAGCCGCTGCAACGGATGAGAAGTGCAAAATCATAGAAATGGTGATAGATATGCATTATGAGATGGACCAGAGTTCTGTTTCTGTCAAGACATTATTCGGGATTGTTCGGGTAACGTTGTGTTTGAACATAAGTAAAAGTTGTAGGAACAAGTTGGAGATTATGATTGGTTCGCAATTGGATCAAGTAACCTTGGACAATTTACTTGTTCCGTCTCCCTATGGGATAAACTACTTATATGATGTGAACCTTGTTCTGAGATTTTTGAAAGCATTTCTGCGCCATGGAAACGGTGCGGCCGCTCCTCTTCGGATGAGGAAAGTTGCTAACTTAATAGATTTGTATATAGCTGAAATAGCTCCCGATCCTTGTTTAAAAACTTCCAAGTTTTTGGCTCTGGCCACAGCTCTTCCAGATTCTGCTAGGGATTCTTGTGATGAGCTCTACCATGCAATGGACATGTATCTTGAGGTTCATACTCAACTATCACAAGAAGAAAGGATAAAGATATGCTGTGGTTTAAACTATGAGAAGCTTTCACCTCAAGCATGCTTACACCTCTCAAAGAACACAAACTTTCCCTCAAAATCATCGGTTCAAGCTCTTGTTTCTCAGCAATCAAAACTCAAAAATTTACTCCAAGCTACAACTCCCATTTCAACTCCATACAGCGATTCATCGTGCGGTTCGGCTCAAAAGAAAGAAAAAGACAATGAACAAGTTGTATTGTATGCTAGCAATTTCGATATTCCACCCGATAACGAGAAACTCAAAGCACATTTGCAAGGAATGCAGTGGAGGGTTATGGAGTTGGAAAAAATCTGTAGGAAAATGCAAACTCAGATGGCTAAGATGGCAAAATCAAAAGCATCTAATAGTTATGGTAAATCTTTGCCAAAGCTTTGTTCATGA 1671 0.3932 MFTFILNLLSITTPINYFFGFCALILCIFSYFYTYSVSMLLTIITQYSRKLAKVFGKSSGSSGKLKVIFHDFPGGAEGFELMLRFCYNNGNAELNPSNLLLARCGAEYMEMNESVKSGSNLCDQTEKLLRGIGYWSWSEILTALKQCQSLLVEDSSVMVERCLEAVVGRLVLASEASPCPSSCSNDSSGVRFSCDSKSTESIKTSFARSTWWFEDLLFLTPPMVFVLVKAMLSSKLDHHVISRFLLFYQKAKFTAAATDEKCKIIEMVIDMHYEMDQSSVSVKTLFGIVRVTLCLNISKSCRNKLEIMIGSQLDQVTLDNLLVPSPYGINYLYDVNLVLRFLKAFLRHGNGAAAPLRMRKVANLIDLYIAEIAPDPCLKTSKFLALATALPDSARDSCDELYHAMDMYLEVHTQLSQEERIKICCGLNYEKLSPQACLHLSKNTNFPSKSSVQALVSQQSKLKNLLQATTPISTPYSDSSCGSAQKKEKDNEQVVLYASNFDIPPDNEKLKAHLQGMQWRVMELEKICRKMQTQMAKMAKSKASNSYGKSLPKLCS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01826 556 Pfam NPH3 family 210 437 IPR027356 -
Vivi5g01826 556 ProSiteProfiles NPH3 domain profile. 210 461 IPR027356 -
Vivi5g01826 556 PANTHER OS12G0117600 PROTEIN 47 536 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01826 Vivi-Chr5 67531060 67533744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01826 50 537 EF-hand Containing Proteins AT3G44820 25.783 1.91e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01826 - - psat:127105255 944.88