Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01802 ATGGAAACAAGATCTTCAAAACGCAAAAAGCTAGCACAGATAGAACAACAGAATGATGCCAAAAAACAACCACCAACAGATCAAATCAGTGATCTACCAGATGCTGTCATTCATCAAATCCTTCTCTTGCTTCCAATCAAATGTGTTGCACAAATGAGTGTTCTTTCGAAACGATGGAAGTTTCTTTGGACAACTTTTCCTGATCTTGATTTCACAACCCTTAATCCATTTCCACTTGTTTCAACCAAAACTCCTAAAAAAGCCTCCAACTTTGCAAAATGTAACCACCCTTTATCATCGCAAAAACTTGATTTCATCACCCAAGTTTTATCTATTCGCGACACGAAACAAAAGGACATAAGGGTTCTTTGTTTTCGCGCCCGTTTGGGCTTTTCGCGATTAAATAGCTTGATTCGTAATGCCATTAGGCATAATGTTAGAGAGCTTGATATTGAAGTTGAAACTGAATTTGAAACGGATGATTTTTTCAACTTTCCTAGATGTATTATTGGTAGTGAGTCTTTACAAGTTTTGAAACTGAAATCGGGTTTTCGATTGCCTCCATCGTCGATTATGAGAAATGGTTTTCAATCTTTGCATACATTGTCACTCTCACTGATTATTTTGTATAATCAGCCTTCTCTATCTGATATGTTCAATGAATCATCTTTTCCCGTTTTGAGAAATTTGCGACTTGATTTGTGTTTCGGATTAACTCATATTCGCGTGGCGTGTCGCGCTCTAGAGGATTTGAACTTGGAAAGATGTTATCAGCTACAAGGTTTGGATGTTTGTGGTGCGAAAATTGAAAGATTGAGAGTATCTAGTTGTTTTGATGCTTTTTGTAGCAAGACTTGGGTGAGAATGAATGTGCCAAAGCTTGAAAATTTGGTTTGGAAATTTAATGCAGTTACTGATGTTGCTGTTTTTGAGAACTCGAATTTTTTGAATGAGGCTTGTATTGGTTTCTATATGTTGAAAGAAGGTAAAGTTAATATGGGCAGGCTTCAAAGTGCTAACAACTTTTTCTCTGGACTGTCTCATGCTCATTCCTTGACTCTTGAAAACCAAACTATTGAGATTCTATCAAAGTATAATGTTTTTCTCGAGCCATTTTATAATCTCAAATCATTAGAGATTCATACTGGTTTGAAAAAGAGAAATGTTCAAGCATTAGCATTTCTATTCAGAAACTCTCCTATCCTCAACACACTGATTCTGAAGATCATCGACGACGATAAGGGCGAAAGAAAACAATGGAATAGAGATTTATGGGATATGACAAACACAGAAGAAGAGAAGTATTGGGAGTCACAGATACCAAGTTTGAAATCTTTTCTACAACACTTGAAAGTGGTCAAAATTCAAGGATTTCTTGATTGTGCAAATGAAGTTACATTGACAAAGTTTCTTCTCAAGCAAGGAAAGGTTTTGGAAAAAATGATATTGTGCAGAGGATATTCAAATAGAAGAGATACTCTGAGGAGACAAAAGATAAGGTCACAAATGATGGGATTTTCTTGGGCTTCTTCTAATGCTAAAGTCGAGTTTCAGTAG 1557 0.361 METRSSKRKKLAQIEQQNDAKKQPPTDQISDLPDAVIHQILLLLPIKCVAQMSVLSKRWKFLWTTFPDLDFTTLNPFPLVSTKTPKKASNFAKCNHPLSSQKLDFITQVLSIRDTKQKDIRVLCFRARLGFSRLNSLIRNAIRHNVRELDIEVETEFETDDFFNFPRCIIGSESLQVLKLKSGFRLPPSSIMRNGFQSLHTLSLSLIILYNQPSLSDMFNESSFPVLRNLRLDLCFGLTHIRVACRALEDLNLERCYQLQGLDVCGAKIERLRVSSCFDAFCSKTWVRMNVPKLENLVWKFNAVTDVAVFENSNFLNEACIGFYMLKEGKVNMGRLQSANNFFSGLSHAHSLTLENQTIEILSKYNVFLEPFYNLKSLEIHTGLKKRNVQALAFLFRNSPILNTLILKIIDDDKGERKQWNRDLWDMTNTEEEKYWESQIPSLKSFLQHLKVVKIQGFLDCANEVTLTKFLLKQGKVLEKMILCRGYSNRRDTLRRQKIRSQMMGFSWASSNAKVEFQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01802 518 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Vivi5g01802 518 CDD F-box_AtFBL13-like 29 64 - -
Vivi5g01802 518 Pfam FBD 444 483 IPR006566 -
Vivi5g01802 518 SUPERFAMILY RNI-like 141 308 - -
Vivi5g01802 518 PANTHER F-BOX/RNI SUPERFAMILY PROTEIN-RELATED 28 488 - -
Vivi5g01802 518 Pfam F-box domain 29 64 IPR001810 GO:0005515
Vivi5g01802 518 ProSiteProfiles F-box domain profile. 26 74 IPR001810 GO:0005515
Vivi5g01802 518 MobiDBLite consensus disorder prediction 1 16 - -
Vivi5g01802 518 SUPERFAMILY F-box domain 25 108 IPR036047 GO:0005515
Vivi5g01802 518 MobiDBLite consensus disorder prediction 1 28 - -
Vivi5g01802 518 SMART 9598neu4hmm 444 518 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01802 Vivi-Chr5 66195564 66197460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01802 27 181 EF-hand Containing Proteins AT5G41840 29.630 1.08e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01802 - - adu:107477862 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01802 5 66195564 66197460 Vivi5g01802 5 66195564 66197460 ECH