Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01801 ATGCCAGAGGCTCCTAAACAAGACCATGCTGAACATGATGATGCTATTAGTGATGATATTATCATTAACAAGAATAAGAAAGCATTGAAATATATTGAAGATGTTACCATCAACACTGATGAAATTCAAGAAAGAGTACTTGGTGAGATCCTGTCTGCTAGTGCAGATGTTGAGTACCTTCAACGTTATGGACTAGATGGACGCACAGACAGAAAAAGTTTCAAAAAGATGGTGCCTGTGGTGTGTTACGAGGATTTGAAGGTGGATATTGATCGTATAGCTAATGGTGATACCTCACCAATTTTGTGCTCTAAACCCATTTCAGAGTTCCTCACTAGTTCTGGAACATCAGGTGGAGAGAGAAAACTGATGCCAACAATAGAACAAGAGCTAGAAAGAAGATCACTACTCTACAGCCTCTTAATGCCAGTCATGGACCAATTTGTTCCCAATTTACACAAAGGCAAAGGAATGTACTTTTTATTCACAAAATCAGAAGCAAAAACACCAGGTGGATTACTTGCACGTCCAGTACTAACAAGTTACTACAAAAGCTCACATTTCAAAAACACAACACATGAAAATGATCCTTACACAAACTACACCAGCCCAATTGAAACCATTCTCTGCCTAGATTCTTATCAAAGCATGTATTCTCAAATCCTATGTGGCCTTTACCAACACGAACAAGTCCTCCGCGTCGGTGCTGTTTTTGCTTCCGGTTTTATTCGCGCTATTAAGTTCCTCGAAAAACACTGGATTAGTTTGTGTAACGACATAAGAACCGGTATCTTAGACGATAAAATCACTGACTTGGATGTTAGAGTGTCGGTTATGAAAATACTTAAACCAAATCCTAAACTTGCAGCATTCCTCGAATTCGAATGCAAGAAAGAGTCATGGAAAGGGATCATTAGTAGATTATGGCCTAATACAAAGTATGTTGATGTTATCGTTACCGGAACAATGTCTCAATATATTCCGATTTTGGATTATTACACCAATGGTCTTCCTCTTGTCTGTACTATGTATGCTTCTTCAGAGTGTTACTTTGGCCTCAACTTAAACCCTTTGTGTGAACCAAATGAGGTTTGTTATACAATTATTCCCACCATGGCCTACTTCGAGTTCTTGCCTTTAAACAAGATCGATGGAAACGACAATTCAATTTCTACCACCGAGCAAGAACATTTAGTTGATCTTGTTGATGTTGAGTTAGGCCAAGAATATGAGCTTGTGGTCACCACTTACGCCGGACTTTATAGGTACCGAGTTGGTGACATACTCCGCGTAGCAGGATTCAAGAACAAGGCACCTCAATTCAACTTCATATGTCGAAAGAACGTTGTTTTAAGCATTGATTCAGATAAAACCGACGAAGTTGAACTCCAAAATGCAGTAAAAGAAGGATCAAACCATCTTTTGAACTATAATGCGTCGCTCACAGAATACACGAGTTGTGCCGATACATCAACTATTCCAGGCCATTATGTACTCTACTGGGAAATATCCAAGAATGAGAATAACTCAATTCCTGATTCTGTTTTCGAGGAATGTTGTTTTACAGTTGAAGAATCTCTCAACAGCGTGTATCGCCAAGGAAGAAAAACCGAATCAATTGGGCCATTGGAAATCAAGGTTGTTGAGAATGGAACATTCGATAAGGTTATGGATTTTGCTCTTAGTCAAGGAGCATCTATAAATCAATACAAAACGCCTCGCTGCATAAAATATGATCCTATTATCGAGCTTCTTAACACGAAGGCGATTTCAAGTTTCTTTAGTCCAAAATGTCCACATTGGGTTCCCGGTCACAAGAATTGGTGA 1827 0.3908 MPEAPKQDHAEHDDAISDDIIINKNKKALKYIEDVTINTDEIQERVLGEILSASADVEYLQRYGLDGRTDRKSFKKMVPVVCYEDLKVDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEQELERRSLLYSLLMPVMDQFVPNLHKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSSHFKNTTHENDPYTNYTSPIETILCLDSYQSMYSQILCGLYQHEQVLRVGAVFASGFIRAIKFLEKHWISLCNDIRTGILDDKITDLDVRVSVMKILKPNPKLAAFLEFECKKESWKGIISRLWPNTKYVDVIVTGTMSQYIPILDYYTNGLPLVCTMYASSECYFGLNLNPLCEPNEVCYTIIPTMAYFEFLPLNKIDGNDNSISTTEQEHLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFICRKNVVLSIDSDKTDEVELQNAVKEGSNHLLNYNASLTEYTSCADTSTIPGHYVLYWEISKNENNSIPDSVFEECCFTVEESLNSVYRQGRKTESIGPLEIKVVENGTFDKVMDFALSQGASINQYKTPRCIKYDPIIELLNTKAISSFFSPKCPHWVPGHKNW 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01801 608 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 24 598 IPR004993 -
Vivi5g01801 608 Pfam GH3 auxin-responsive promoter 32 577 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01801 Vivi-Chr5 66191326 66195471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01801 24 595 EF-hand Containing Proteins AT1G23160 50.515 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01801 K14487 - gmx:100819676 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01801 5 66191326 66195471 Vivi5g01801 5 66191326 66195471 ECH