Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01786 ATGGAAGATGGGTTAATATCAGTAGACCGTTGGGCAAAGGGTAGCGAGGCCTACTTCCTAACCCACCTCCACTCCGATCACACTCAAGGCCTCTCTTCATCTTGGTCCCATGGCCCACTCTTCTGCTCCTCAATCACCGCCAAACTCCTCCCCATCAAGTACCCTAATCTCGACCTCTCCCTCCTCCGCATTCTTCAAATCGGTACCTCCCACACTCTCTCCCTCCGCTCACCTTCTTCTAACGATTTCACCACCGTCCATGTCACCGCCATCGATGCCTGCCACTGCCCCGGCTCGATTATGTTGCTGTTTTCGGGAGATTTTGGTTGTTTGCTTTGTACCGGTGACTTTCGTTGGGAGGCTGATTGCGAGAAGGTGAGGATCGCCAAGGATATGCTTAGCGATGCTCTGAATGCTCATGGTGGTGATGGTGTTGATGTTGTTTATCTTGATAATACCTACGCTAATCCTACCTATGATTTTCCAACTCGTAGTGTAGCCACTCAGCAGGCTATTGATATAATTTCGTCCCATCCTGATCACGATGTTATTATTGGAATCAATACTCTGGGGAAAGAAGATCTCTTGGTTCAGATTTCAAATGCACTTAACATATTGATTTGGGTGTGGCCAGAGCGGTTGCAGACTATGCATCTTCTTGGTCTCCCTGATATATTTACAACAGATACAACTCTTACTAGAGTTAGAGCTGTTCCTATGTATAGCTTTAGCATTGATACATTGGAGGCGTTAAATCTAATCCGTCCAAATACGCGTCCGACTATAGGAATTTTGCCATCAGGTCTTCCATGGGTAAAGAAATCCCTTAAAAAGGGCGAGTTTCTCTCTGGTTCTTTTTTGACATCGCGGTATAAGAGAACCAGACGGAGTGCAAAAAGTACCCAAGTCCTGATTGATAAGCAAACTGGAGTAGCAGGAACTCCCAAAAAGTTTGACCAGTATATATTTTCAGTTCCCTACTCTGATCACTCAAATTTTGCAGAGCTAGAGGATTTTATAAAGTTTGTCAAACCAAACCGTCTGAAGGGTATTGTTTCTCCCTCTTCATGCTATATAGAACCCATGTACTATTTTGGCCGACTTTGTACCGGTAACCAACCAGTACAGAAGCTACATACCGTGTCCGAAATGATAGAAAGTGGTGATTTTGAAGATGATAATGCTGAGTTAGATAGAAACAGAAGCAAGGAAAGTTTTAAAATGAATGAAAGTGGTAAAAGGGTAGTAACAATCAGCCCCGAAACTTCATTTGAAGATGATAGTGTTGTGTTAGATAGAAACAAAAGTGGTAAAAGAGTAGTAGCTCTCAGCCCCAAAACTTCAGTTAGAGGTGATGGTGATATTGAGCCAGATAGAAACAGAAGTAAGGCTTTGAAGGTTAAGCTATCAGGTTTTCGTATGAGAGGGTTAAGCATATTCAGAAGAAAACGTCGTGGAGCTAAACTTTCAGACTATGTTGAAGAATGA 1488 0.4321 MEDGLISVDRWAKGSEAYFLTHLHSDHTQGLSSSWSHGPLFCSSITAKLLPIKYPNLDLSLLRILQIGTSHTLSLRSPSSNDFTTVHVTAIDACHCPGSIMLLFSGDFGCLLCTGDFRWEADCEKVRIAKDMLSDALNAHGGDGVDVVYLDNTYANPTYDFPTRSVATQQAIDIISSHPDHDVIIGINTLGKEDLLVQISNALNILIWVWPERLQTMHLLGLPDIFTTDTTLTRVRAVPMYSFSIDTLEALNLIRPNTRPTIGILPSGLPWVKKSLKKGEFLSGSFLTSRYKRTRRSAKSTQVLIDKQTGVAGTPKKFDQYIFSVPYSDHSNFAELEDFIKFVKPNRLKGIVSPSSCYIEPMYYFGRLCTGNQPVQKLHTVSEMIESGDFEDDNAELDRNRSKESFKMNESGKRVVTISPETSFEDDSVVLDRNKSGKRVVALSPKTSVRGDGDIEPDRNRSKALKVKLSGFRMRGLSIFRRKRRGAKLSDYVEE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01786 495 Pfam DNA repair metallo-beta-lactamase 225 348 IPR011084 -
Vivi5g01786 495 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 3 411 - -
Vivi5g01786 495 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 348 IPR036866 -
Vivi5g01786 495 Gene3D - 6 350 IPR036866 -
Vivi5g01786 495 FunFam Interstrand crosslink repair protein 3 177 - -
Vivi5g01786 495 Gene3D - 160 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01786 Vivi-Chr5 64938111 64940351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01786 K15341 - gmx:100775842 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01786 5 64938111 64940351 Vivi5g01786 5 64938111 64940351 ECH