Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01715 ATGGAGCCAACACTTGTGAGCAACAACAAAAACAAGAGCAGCAATGGCAGTGGAAACTTTGACTTTGAAAAGATTATTAGTTGGTTTGAAGATGTATCTAACAACACAGGCTCGGTTCAAACTGAGATATTAAGCAATATTCTGAAACAGAATAATGGTGTTGAATATCTGAAGAAATGGTTGGGGGGTTACAATATTCTAGAAATGGAAGCATGTGCATTGGAATCCCTTTTCACTTCTTTGGTTCCTATTGCTTCTCATGCTGATTTTGAACCATTCATTCAGAGGATTTCTGATGGAGATACTGCTCCTTTACTCACTCGGCAACCTATAACCACTCTTTCCTTAAGCTCTGGAACAACAGATGGGAGGCAGAAATTCGTACCTTTTACTCGACACAGTGCTCAAACCACGCTGCAAATATTCACTTTATCAGCAGCTTATAGATCAAGGGTTTATCCCATAAGAGAAGGAGGAAGGGTTCTTGAATTCATATATGGTAGCAATTGTTTCAAAACAAAGGGAAATTTAACAGTAGGAACAGCAACAACACATTGCTATGCAAGTGAAGAATTCAAAACCAAAAATCACAAAGCAAAATCATTTAGTTGCAGTCCACAAGAAGTAATTTTCAATGGAGACTACAAACAATCCACATACTGTCACCTCCTCCTCGGCCTCTTCTATTCCGATCAAGTAGAATTCATCACCTCGGCTTTCGTCTACACCATGGTGCAAGCATTCACAACATTCGAAGAACATTGGAGAGAATTATGTAATGACATTAAAAATGGCACACTTAGTTCAAGAATTAAGTCACCAAAACTCCGAGATGCCATTTTGGAGATAATAAATTCTAAAAATGGCCCAAATACAAACTTGGCTTCAAAATTAGAAGGGTATTGTGAAGAGCTGGAGAAAGTGGATTGGTTTGGTTTGATTCCAAAGATATGGCCAAATGCAAAGTACATGTATTCAATAATGACAGGTTCTATGATACCATATTTGAAAAAACTTAGACATTATGGAAATGGGTTGCCTATGATTAGTGCTGATTATGGATCAACTGAGAGCTGGATTGGAGTTAATGTTGATCCTAGTTTGGATCCAGAACAAGTAACATTTGCTGTTGTTCCAACATTCTCTTACTTTGAGTTCATACCTCTTCATAGAAATAAACAAGATAGCTGTGATGATTTCTTTGAAGACAAACCTATTCCACTCTCTAAGGTTATTGTTGGACAACACTACGAAATTGTACTCACTACTTTTACAGGATTGTACAGATGCAGACTAGGAGACGTGGTAGAAGTGGCAGGGTTTCACAATGGGACCCCAAAATTAAACTTCGTATGCAGAAGAAAACTAATTCTTACAGTCAACATAGACAAAAACACTGAGAAGGATCTTCAACTAGTGGTAGAGAGAGGTTCACAGATTTTAAATAAATCAAAAGCAGAAATTGTTGACTTTACTAGCAATGCAGATGTGAAAAACCAACCTGGTCACTATGTTATTTACTGGGAGATTAAAGGAGAAGTTGAGGATAATGTACTTGATGATTGTTGTAGAGAAATGGATCTATCTTTTGCTGATCATGGATATGTGGTTTCAAGGAAAACAAACTCAATTGGGCCATTAGAACTTTGCATTTTGGAGAGAGGGACTTTTAAGAAGATTTTGGATAGTTTCATAGCCAGTGGAGTTGCATTGAACCAGTTTAAGACTCCTAGGTGCACTAACAATCATGTGTTACTCAAAATTCTTGACACTTGTACCATTAAAAGGTTTCATAGCACAGCTTATAGTTCAATTAATTAA 1821 0.3707 MEPTLVSNNKNKSSNGSGNFDFEKIISWFEDVSNNTGSVQTEILSNILKQNNGVEYLKKWLGGYNILEMEACALESLFTSLVPIASHADFEPFIQRISDGDTAPLLTRQPITTLSLSSGTTDGRQKFVPFTRHSAQTTLQIFTLSAAYRSRVYPIREGGRVLEFIYGSNCFKTKGNLTVGTATTHCYASEEFKTKNHKAKSFSCSPQEVIFNGDYKQSTYCHLLLGLFYSDQVEFITSAFVYTMVQAFTTFEEHWRELCNDIKNGTLSSRIKSPKLRDAILEIINSKNGPNTNLASKLEGYCEELEKVDWFGLIPKIWPNAKYMYSIMTGSMIPYLKKLRHYGNGLPMISADYGSTESWIGVNVDPSLDPEQVTFAVVPTFSYFEFIPLHRNKQDSCDDFFEDKPIPLSKVIVGQHYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQILNKSKAEIVDFTSNADVKNQPGHYVIYWEIKGEVEDNVLDDCCREMDLSFADHGYVVSRKTNSIGPLELCILERGTFKKILDSFIASGVALNQFKTPRCTNNHVLLKILDTCTIKRFHSTAYSSIN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01715 606 Pfam GH3 auxin-responsive promoter 28 582 IPR004993 -
Vivi5g01715 606 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 602 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01715 Vivi-Chr5 60925884 60931647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01715 29 600 EF-hand Containing Proteins AT1G23160 34.300 5.01e-117 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01715 K14487 - gmx:100792358 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01715 5 60925884 60931647 Vivi5g01715 5 60925884 60931647 ECH