Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01639 ATGATGGTGGATTTGGGTCCGTTCTCAAACGAGAGCTTCGACCCAAAGAAATGGATCAACTCGGCGTGTCAGAGTCGACACCCCCAGGAGTCATTGGATAAGCACCTCGTCGATTTGGAGATGAAGCTCCAGATGGTTTCCGAGGAAATCGCCGCTTCTCTCGAGGACCAAAGCACCGCTGCTCTCCTCCGTGTTCCTCGCGCCACTCGGGACGTCATCCGCCTCCGCGATGATGCCGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCAAAAGCTCAAGAAGGCAGAGGGATCGTCTTCTGAATCTATAGCGGCACTTGCTAAGGTGGATGTAGTCAAGCAGAGGATGGAAGCTGCTTATGAAACTTTGCAGGATGCTGCTGGATTAACCCAATTAAGTTCCACAGTGGAGGATGTATTCGCCACTGGTGATCTCCCTCGTGCTGCTGAAACACTTGCTAATATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAACAGCTTCAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTTACTGATGCATTATCCAATCGCAAGGTTGATGCTGCTCAAGATTTGCGTGGAATTCTCATTAGAATAGGAAGGTTTAAGTCTTTGGAATCTCAATATTCAAAGGTACATCTAAAACCAATTAAACAACTCTGGGAAGACTTTGAATCAAGAGAATGGGCTAATAAGTCTGCAAATGAAAAGAATGAAATGGAGAAAACATCAAGTGGTGGCAATTTTCAGTCTGTTTCACCTGCAATATCCTTCTCCAATTGGTTACCAAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCAGAAGATTATAAAACTCTTGTCCCGAGGTTACTAAGTGAGACAATGATGGCTATAGGTGCAAGTTTCATATCTCATATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTATCAGATATTTTATCTGGAGACATGCAAAAGGGTATTAAGCTTCAGACAAAGCACCTGGAGGCTTTGATTGAATTACACAATATCACCGGGTCCTTTGCAAGGAATATTCAACACTTATTTTCTGGTTCTGACGTACAAGTTTTAAGGGATGTGCTGAAAGCAGTGTACTTGCCATATGAATCGTTTAAACAGAGGTATGGACAGATGGAGCGTGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTAGGAGCCCAAGGAGTTGAACTCAGTGAAACTGTTCGTAGGATGGAGGAGTCTATTCCTCAAGTTATTATACTTCTTGAAGCTTCTGCCGAGAGATGCATCAGTTTCACTGGAGGTTCTGAGGCAGATGAGCTGATTCTCGCCCTTGATGATATAATGTTACAATACATTTCCACTCTACAAGAAACTCTCAGGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGCGGTGGTACTGGAAAGAAAGACATCGAGAAGAAAGATGGAAGTCAAAATGCTCGGAGAGTTGATTTGGTCTCAAATGAAGAGGAATGGTCCATGGTCCAAGGGGCACTGCAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCCTCTGTCTTCGAAGCATCTTTAAGAGCTACTCTTGCTAGATTAAGCACAACTTTATCTTTTTCAGCATTGGGTTCAAGTTTAGATCAAAACCAGACTATAAATGGTAATGAGGACGGAGAGCCATCTTTTGGTGGGAGGGCTGCCTTGGACATGGCAACACTGCGGCTGGTTGACGTGCCCGAGAAAGCTAGGAAACTCTTTAGCCTCTTAAATCAGTCTAAAGATCCCCGTTTCCATGCTCTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGAAGACACAGTTAATGAACTTGTATATGATGTCCTCATATCCAAAGTACGGCAACGCCTCAGTGACGTGTCCCGTTTGCCAATATGGTCAACAGTTGAGGAACAGAGTGCTTTTCCTCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGCGAGTATCTTCTTACTTTACCCCAACAATTGGAGCCCCTTGCTGAGGGAATATCTAGCAGTGAAGCGAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTCTACATAGAGCAGTTGCGGGGGATTCAGTATATTACAGACCGCGGTGCGCAGCAGCTATCAGTTGATATTGATTATCTTAGTAACGTGCTTTCGGCTCTTTCAATGCCAATCCCTGGAGTTCTGGCTACATTTCAAAGTTGTCTTTCTACCTCAAGAGACCAGATAAAAGATCTTCTGAAGACAGATTCAGCAAACCAATTTGATCTGCCAACAGCAAACCTTGTGTGTAAGATGCGGCGGGTGAATTTAGATTCGTGA 2505 0.4459 MMVDLGPFSNESFDPKKWINSACQSRHPQESLDKHLVDLEMKLQMVSEEIAASLEDQSTAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSSESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFATGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLQVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSKVHLKPIKQLWEDFESREWANKSANEKNEMEKTSSGGNFQSVSPAISFSNWLPSFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLEALIELHNITGSFARNIQHLFSGSDVQVLRDVLKAVYLPYESFKQRYGQMERAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEASAERCISFTGGSEADELILALDDIMLQYISTLQETLRSLRTVCGVDYGGGGTGKKDIEKKDGSQNARRVDLVSNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSALGSSLDQNQTINGNEDGEPSFGGRAALDMATLRLVDVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFEDTVNELVYDVLISKVRQRLSDVSRLPIWSTVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISSSEANDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPGVLATFQSCLSTSRDQIKDLLKTDSANQFDLPTANLVCKMRRVNLDS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01639 834 Pfam Golgi complex component 7 (COG7) 4 829 IPR019335 GO:0006886|GO:0017119
Vivi5g01639 834 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 3 830 IPR019335 GO:0006886|GO:0017119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01639 Vivi-Chr5 54492166 54497237 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01639 K20294 - gmx:100794449 1460.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01639 5 54492166 54497237 Vivi5g01639 5 54492166 54497237 ECH