LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g01594	ATGGCATTCACCGAATCCGAGTCACCTCTTCTTCTTCCATCAGGTTCAGGCACAAAGGAAAAAGCACCAGAAGACAAATGGCATTTAGCGTACATGATCTATTTCTTTCTCGGCTTTGGCTATTTACTTCCATGGAACGCATTCATCACAGCCGTTGATTACTTCTCTTATCTTTACCCTGATGCAAGCGTTGATCGCATCTTCGCCGTTGTTTATATGCTCGTTGGTCTCTTTGGGCTTACGCTTATTATTCTGTATAGACACAAATCTCAGGCCCATGTTAGGATTAACTTAGGTCTTGCTCTTTTTGTTGTTTCGTTGCTTGTTGTTCCTTTGATTGATGCGTTTTATGTAAAGGGTCGGGTCGGGTTTTATGGTGGGTTTTATGTTACTGCCGGAGCAGTTGGGATTGCTGGTGTGGCGGATGCTTTGGTGCAGGGATCTATTGTTGGTTCTGCCGGGGAGTTGCCAGAGAGGTATATGCAAGCTGTCATCGCTGGCACTGCTGCTTCTGGGGTGGTTGTTTCTTTCCTAAGGATATTTACAAAAGCTGTTTACACACAAGATGTCTCCGGCTTGCAAAAGAGTGCAAATCTCTACTTTGGTGTATCGATTGTGATCATGTTCATATGCATGGTTTTATACAGTCTAGCAAACAGACTTCCCATTATGAAGTACTATGATGACGTTAAGATTCAGGCAGTTGCGGTGGAAGACGACAATGGTCCTTTGACTGGTTCCGTATGGAGGTCGACTGTATGGGAAACTGTTGGAACAATCAAGTGGTATGGATTTGGCTTGATACTCATTTATGTTGTGACTCTTGCAATATTTCCAGGCTACATTACTGAAGATGTCCACTCTGAACTTCTCAAGGATTGGTATCCAGTTCTACTTATCACTTGCTTTAATGTGTTTGACCTTGTTGGCAAAAGCTTTACTGCAGTATACCTTCTGGAGAATGCCAAAATTGCTATAGGTTGTTGCATAGCAAGACTGTTGTTTTTCCCTCTATTCTTAGGGTGCTTGCATGGCCCGAAATTCTTCCGGACAGAGATTCCTGTCACAGTACTGACTTGTATTTTAGGGCTTACAAATGGTTATCTTACGAGTGTATTGATGATTTTAGCTCCTAAAACTGTGAAGTTGCAGCATGCAGAGACTGCAGGGATTGTGAGTGTGTTATTCTTAGTTGTTGGTCTAGCTTCAGGGTCTATTATAGCTTGGTTTTGGGTCATCTGA	1242	0.4275	MAFTESESPLLLPSGSGTKEKAPEDKWHLAYMIYFFLGFGYLLPWNAFITAVDYFSYLYPDASVDRIFAVVYMLVGLFGLTLIILYRHKSQAHVRINLGLALFVVSLLVVPLIDAFYVKGRVGFYGGFYVTAGAVGIAGVADALVQGSIVGSAGELPERYMQAVIAGTAASGVVVSFLRIFTKAVYTQDVSGLQKSANLYFGVSIVIMFICMVLYSLANRLPIMKYYDDVKIQAVAVEDDNGPLTGSVWRSTVWETVGTIKWYGFGLILIYVVTLAIFPGYITEDVHSELLKDWYPVLLITCFNVFDLVGKSFTAVYLLENAKIAIGCCIARLLFFPLFLGCLHGPKFFRTEIPVTVLTCILGLTNGYLTSVLMILAPKTVKLQHAETAGIVSVLFLVVGLASGSIIAWFWVI	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g01594	413	PANTHER	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER	19	411	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Vivi5g01594	413	MobiDBLite	consensus disorder prediction	1	21	-	-
	Vivi5g01594	413	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	299	320	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Vivi5g01594	413	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	133	153	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Vivi5g01594	413	PRINTS	Delayed-early response protein/equilibrative nucleoside transporter signature	389	413	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Vivi5g01594	413	PIRSF	ENT	2	413	IPR002259	GO:0005337\|GO:0016020\|GO:1901642
	Vivi5g01594	413	Pfam	Nucleoside transporter	135	412	IPR002259	GO:0005337\|GO:0016020\|GO:1901642

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g01594	Vivi-Chr5	50840434	50842929	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi5g01594	7	413	Organic Solute Cotransporters	AT1G70330	66.098	0.0	544

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g01594	K15014		-	gmx:100802339	677.167