Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01593 ATGATGAGAACGCTATCTCAGACATTTCGCTCTGTCAAACGCCCAATTCCAAACCCTAAATCATCCAAATCTTCCTCCCCTACAAAATCCGAATTCAAAATCAACGCCAAACCAAAATCAGACTCATGGTGTGTTTATCTCATTCTCTCCACCAACCTCCCAATCAAAACATACGTTGGCGTCACAACCAATTTCCCTCGCCGTTTAAGACAGCATAATGGTGAACTTAAAGGTGGTGCAAAAGCTTCCCGTGCTGGAAGGCCATGGGTTTGTGCATGTATTGTTTGTGGTTTTACAGACCGAAGTGAAGCTTGTGTATTTGAATCGAAATGGAAAGCTTTGACACGGAGACTTCCACGCAAAAATCAAAATGGAGAACCCTCCAAGCAAAGCAAAGATCCGTCACGCCCACTGCTGCAACACAGACAAGCTGCTTTAAATAGAGTGAAAACCTCACTTGACTGCACAAACTTAGAAATTAATTGGCATTTGGATCCACTTTGA 504 0.4306 MMRTLSQTFRSVKRPIPNPKSSKSSSPTKSEFKINAKPKSDSWCVYLILSTNLPIKTYVGVTTNFPRRLRQHNGELKGGAKASRAGRPWVCACIVCGFTDRSEACVFESKWKALTRRLPRKNQNGEPSKQSKDPSRPLLQHRQAALNRVKTSLDCTNLEINWHLDPL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01593 167 SUPERFAMILY GIY-YIG endonuclease 42 118 IPR035901 -
Vivi5g01593 167 CDD GIY-YIG_SLX1 43 112 - -
Vivi5g01593 167 Gene3D - 37 141 IPR035901 -
Vivi5g01593 167 MobiDBLite consensus disorder prediction 1 33 - -
Vivi5g01593 167 MobiDBLite consensus disorder prediction 118 139 - -
Vivi5g01593 167 Pfam GIY-YIG catalytic domain 43 117 IPR000305 -
Vivi5g01593 167 ProSiteProfiles GIY-YIG domain profile. 41 123 IPR000305 -
Vivi5g01593 167 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 22 152 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01593 K15078 - gmx:100805152 262.692