Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01565 ATGGCTATGGCTTCTCCATTCTCCACCATCTACGCTCGTTCTTTCTCTCTCCCCAATCTAAACCATCCCTTTTCCACTTCTCTCTCACTCCCACCTCTCACCATCACTTCTCGCCCTCCACATTCTCATTCCAAAATCTTCACTTCCCGTCCTCTTCTCGCCACACTTCCCAAAACCTCAACCATAATTCATGCATCCGGAAACGGCGGCGGAATCGGAGGAGATAACGGTGGTGGTGGGGGAGGAGGAGGCGATGGCGATGATGGTGGATCGGGGGACAGAGATCGGAACAGAGAAGAAGCGCTATTGGTACTTGCGGAGGTCGGTAAGCCGCTGGAGAGTTTGCCTGCTGATCTATCAGAGGCGGTTAAAGCTGGACGAGTTCCGGGTTCGATTGTGAAGAGATTTTTCGAGCTGCAAAAATCCAGTGTGTTTCGGTGGTTGCTTAATTTTGGGGGATTTAGAGAGAGATTGCTTGCTGATGATTTGTTCCTCGCTAAAGTTGCCATGGAATGCGGTGTTGGAATTTTTACCAAGACTGCTGCGGAGTTGGAGAAGCGAAAAGAAAACTTTACTAAAGAGCTTGATTTTGTTTGTGCTGATGTGGTCATGGCCATTGTAGCAGATTTTATGCTCGTGTGGCTTCCTGCTCCGACGGTTTCTCTTCGACCACCACTTTCTGTCAGTGCCGGGGTTATTGCTAAGTTCTTCTTTGGCTGCCCTGAAAATGCTTTTCAGGTGGCTTTGGCTGGATCGTCGTTTTCACTTATACAGCGAATCGGTGCTATTGTACGGAACGGAGCTAAGCTATTTGCAGTTGGAACTGGTGCATCACTGATTGGTACTGGTGTAACAAACGCATTGATTAATGCGCGGAAGGTTGTTGATAAATCTTTTGCCGACGAGGCTGAGGAAGTACCGGTATTATCTACCAGTGTTGCGTATGGTGTTTACATGGCAGTATCTAGCAACCTAAGGTACCAAATTCTAGCTGGAATTATCGAACAACGGATTTTAGATCCTTTGCTGCACCAAAACAAGCTCTTGTTAAGTGCCGTCTGCTTTGCTGTTAGAACCGGAAACACTTTCTTGGGCTCACTATTGTGGGTGGATTATGCTCGGTGGGTTGGAGTCCAGAAGATAAGGGATTAA 1152 0.4766 MAMASPFSTIYARSFSLPNLNHPFSTSLSLPPLTITSRPPHSHSKIFTSRPLLATLPKTSTIIHASGNGGGIGGDNGGGGGGGGDGDDGGSGDRDRNREEALLVLAEVGKPLESLPADLSEAVKAGRVPGSIVKRFFELQKSSVFRWLLNFGGFRERLLADDLFLAKVAMECGVGIFTKTAAELEKRKENFTKELDFVCADVVMAIVADFMLVWLPAPTVSLRPPLSVSAGVIAKFFFGCPENAFQVALAGSSFSLIQRIGAIVRNGAKLFAVGTGASLIGTGVTNALINARKVVDKSFADEAEEVPVLSTSVAYGVYMAVSSNLRYQILAGIIEQRILDPLLHQNKLLLSAVCFAVRTGNTFLGSLLWVDYARWVGVQKIRD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01565 383 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 21 380 - -
Vivi5g01565 383 MobiDBLite consensus disorder prediction 65 95 - -
Vivi5g01565 383 Coils Coil 181 201 - -
Vivi5g01565 383 Pfam Protein RETICULATA-related 156 333 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01565 Vivi-Chr5 49415976 49419278 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01565 - - lja:Lj3g3v3678790.1 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01565 5 49415976 49419278 Vivi5g01565 5 49415976 49419278 ECH