Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01490 ATGGGTCTTTTTCAAAGCTTATTGGTACTACTAGGTTTGGTTTTGAATTTGGCGATTCTATGTAATGGAGGTACTACTAGTGCTTTTGTTAGGAATGTTGAGAAGGCCGTTGATATGCCACTTGATAGCGATGTTTTTGCTGTTCCTTCTGGTTATAATGCTCCCCAACAGGTTCATATAACACAAGGTGATCTTGTGGGGAAAGCGGTGATAGTTTCGTGGGTGACTGAGGATGAACCGGGGTCAAATGCAGTGCGTTACTGGCGTGAGAGTAGCAACCGGAAGAAGCTTGCTAGAGGGAAAATTGTTACTTATAGATTCTTCAATTATACATCTGGTTTTATTCATCATGCTACTATAAGGAATTTGGAGTATGATACAAAATATTATTATGAGGTTGGACTTGAAAACACAACAAGGAAGTTTTGGTTTACAACTCCTCCTGAAATCGGTCCTGATGTTCCATACACATTTGGTCTCATAGGGGATCTTGGTCAGAGCTATGATTCAAACAGGACACTTTCTCATTATGAATTGAACCCGAGAAAAGGGCAAACAGTGCTGTTTGTTGGAGATCTTTCTTATGCAGACAATTACCCCAATCATGACAATAATAGGTGGGATACTTGGGGAAGGTTTGCAGAGAGGAGTGTTGCTTATCAACCGTGGATATGGACTGTTGGAAACCATGAAATTGATTTTGCTCCAGAAATTGGAGAAACAAAACCATTCAAGCCTTTTTCGCACCGATACCGTACTCCTTATAAAGCATCTCAAAGTACTTCACCCTTTTGGTATTCTATCAAAAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATACGGAAAATATACACCACAATACAAATGGCTTGAACAGGAGCTACCGAAAGTTAACAGAACAGAAACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAACAGCTACAACTATCATTACATGGAAGGTGAAACAATGAGAGTAATGTATGAGCCATGGTTTGTTAAGTACAAGGTTGATGTTGTCTATGCTGGCCATGTCCATGCCTACGAACGTTCTGAACGTGTCTCCAATGTTGCGTACAATATTGTGAATGGCATTTGCACTCCGATAAAAGATGAATCAGCTCCTGTATACATAACCATTGGAGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAGCCATCTTACTCAGCATTCCGAGAAGCTAGTTTCGGACATGCCATATTCGATATAAAGAACAGAACACATGCTCATTATAGCTGGCACAGGAATCAGGATGGTGAAAATGTTGAGGGTGATTCTCTTTGGTTTCTCAACAGATTTTGGAACCCACTTGATGATTCCTCAGCTCATGTTTCCCATTAA 1398 0.407 MGLFQSLLVLLGLVLNLAILCNGGTTSAFVRNVEKAVDMPLDSDVFAVPSGYNAPQQVHITQGDLVGKAVIVSWVTEDEPGSNAVRYWRESSNRKKLARGKIVTYRFFNYTSGFIHHATIRNLEYDTKYYYEVGLENTTRKFWFTTPPEIGPDVPYTFGLIGDLGQSYDSNRTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNNRWDTWGRFAERSVAYQPWIWTVGNHEIDFAPEIGETKPFKPFSHRYRTPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEQELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVYAGHVHAYERSERVSNVAYNIVNGICTPIKDESAPVYITIGDGGNLEGLATNMTEPQPSYSAFREASFGHAIFDIKNRTHAHYSWHRNQDGENVEGDSLWFLNRFWNPLDDSSAHVSH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01490 465 Gene3D - 54 150 - -
Vivi5g01490 465 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 151 459 - -
Vivi5g01490 465 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 54 150 - -
Vivi5g01490 465 Pfam Purple acid Phosphatase, N-terminal domain 55 146 IPR015914 GO:0003993|GO:0046872
Vivi5g01490 465 SUPERFAMILY Metallo-dependent phosphatases 152 458 IPR029052 -
Vivi5g01490 465 CDD MPP_PAPs 152 450 IPR041792 -
Vivi5g01490 465 Gene3D - 151 460 IPR029052 -
Vivi5g01490 465 Pfam Calcineurin-like phosphoesterase 157 355 IPR004843 GO:0016787
Vivi5g01490 465 PANTHER ACID PHOSPHATASE RELATED 8 448 IPR039331 GO:0003993
Vivi5g01490 465 SUPERFAMILY Purple acid phosphatase, N-terminal domain 37 148 IPR008963 GO:0003993|GO:0046872
Vivi5g01490 465 Pfam Iron/zinc purple acid phosphatase-like protein C 381 439 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01490 Vivi-Chr5 45233087 45236047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01490 42 439 Miscellaneous Gene Families AT1G13900 24.459 1.01e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01490 K22390 - gmx:100807555 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01490 5 45233087 45236047 Vivi5g01490 5 45233087 45236047 ECH