Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01316 ATGGATGAGCATGTAGCAGCTTTGCACACTGCTACTAACGCTTTGCAGGCATTAGGAAGGGGTTTTGATGTTAATTTTGATACTAGGTTGCTTTATTGTAAAGGGGTTTCAGGTTCTAGGGTGGTTGAGATTGATGAACAGTATCAGAGGGATTTATGTTTGTATGATGATGTTGTTGTTCCTAATGTTTCAAGGGATATTAGAGTCTTTCGTGAATCCATGGGAAGGCAGAGTTCTGGTGTCTGCAGTTTTCAAGAGATGGTAGATTATTTTAATCATAAGGCAGATATACCCGGGAGCAATCCTCTTGGGAGCTTCAATTCTGCATTTAGTTTTACTGGTTCAAAGCATGTTGATGCTGCAGCTACAAAAACCTTGTCTTCAGACGGGTTTTACATTCCCCTTGCAAAGGTTCAGCTTCCGAAATCGAACTTAAAGTTGCAAGAAAATGTCAAAAGGGCTATCCCGGTCAATTGGGATCCACCATCCTTAGCAAGCTTCATCGAAACTTTTGGGACACATGTCATTACATCAATAACTATTGGCGGTAAAGATGTTATATACGTCAAGCAACACCATACTTCACCTTTTTCAAAGTTGGAGATAAAAAACTATATTCAGGATATCGGAAATCAAAGATTCTCTGACATCAATAGCCACACGAGTTCAGGTCAAACAAAATCCAAGGATAAGGGCGTTGAACCATTTTCATTCAATAGTCAAGGGATTTACCCTCAACCTACAACTGCAACATATTCTACCGGGAAAGAAGATGTCACTGTCATATTTAGAAGAAGAGGAGGTGATGATTTGGAACAAAACCACCGTGTATGGTTAACAACCGTCAAGTCCTCCCCAGATATAATAGAGATGGCTTTCTGTCCTATAACAGATCTCCTTGATGAAATACCGGCCAAGGAGCATTTGACCCGCACAATTGGTCTTTATCTTGAATATAAACCTCCAATTGAAGAACTTAGATACTTCCTAGAGTTTCAGATTCCTCGTGTTTGGGCTCCTTTACATGACAGGATCGCCGGTCAACAACGGAAGGAACCTGTTTGCCCGTCTTTACAGTTCAGCATAATGGGCCAAAAACTTTATGTCAGTCAAGAACAGATTACAGTTGGACGAAGACCAGTAACCGGCTTACGTCTTTGTCTCGAAGGAAGCAAACAGAATCGGCTGAGTGTTCATATTCAACACCTGGTATCCCTTCCAAAGATCCTTCAGCCATATTGGGACAGCCATGTAGCTATTGGTGCTCCGAAGTGGCAGGGACCCGAGGAGCAAGATAGCCGGTGGTTTGAACCGGTTAAGTGGAAGAATTTTTCTCATGTCAGCACCGCGCCTATCGAGAATCCCGAAACCTTCATCGGAGACTTCTCCGGCGTATGCATAGTCACAGGAGCTCAGCTTGGAGTATGGGATTTCGGATCACGGAACGTCCTTTACATAAAGCTCTTATACTCAAGGCTACCCGGTTGCACCATCCGAAGATCACTTTGGGATCACGTACCAAACAAGCCGCAAAAATCTCCAACCTCCGGAAACTCTTCCAACACAGCCAACACAACAAGCTCAGGTTTGAGAGAATATAACAACACCACCACAACAAACAAGTTAGCGAAGTATGTTGATTTGTCCGAAATGAGCAAAGGACCTGAAGATCCTCCTGGTCATTGGCTAGTCACCGGCGGAAAGCTCGGTGTCGAAAAAGGGAAAATCGTTTTGCGGTTGAAATACTCATTGCTTAATTACTGA 1764 0.4314 MDEHVAALHTATNALQALGRGFDVNFDTRLLYCKGVSGSRVVEIDEQYQRDLCLYDDVVVPNVSRDIRVFRESMGRQSSGVCSFQEMVDYFNHKADIPGSNPLGSFNSAFSFTGSKHVDAAATKTLSSDGFYIPLAKVQLPKSNLKLQENVKRAIPVNWDPPSLASFIETFGTHVITSITIGGKDVIYVKQHHTSPFSKLEIKNYIQDIGNQRFSDINSHTSSGQTKSKDKGVEPFSFNSQGIYPQPTTATYSTGKEDVTVIFRRRGGDDLEQNHRVWLTTVKSSPDIIEMAFCPITDLLDEIPAKEHLTRTIGLYLEYKPPIEELRYFLEFQIPRVWAPLHDRIAGQQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLRLCLEGSKQNRLSVHIQHLVSLPKILQPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVCIVTGAQLGVWDFGSRNVLYIKLLYSRLPGCTIRRSLWDHVPNKPQKSPTSGNSSNTANTTSSGLREYNNTTTTNKLAKYVDLSEMSKGPEDPPGHWLVTGGKLGVEKGKIVLRLKYSLLNY 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01316 587 MobiDBLite consensus disorder prediction 507 534 - -
Vivi5g01316 587 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 587 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vivi5g01316 587 Pfam MAC/Perforin domain 104 316 IPR020864 -
Vivi5g01316 587 MobiDBLite consensus disorder prediction 508 534 - -
Vivi5g01316 587 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Vivi5g01316 587 SMART MACPF_8 123 318 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01316 Vivi-Chr5 35868632 35873187 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01316 - - aprc:113849343 1030.01