Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01156 ATGACGGACTTGCCGGAGAATCGCCGGCGTTCTTCTTCCGATTCGTCGAGTTCGAGCGATAATTCGGTCAGAGTGGAGCATGATCAAGGTGCTGGGAGCGTTAGTACTAGCAAGGAAGTTGAGGAGAGTACTATCGATGTTGTTTCCAATGGAGTTTCCGTTAATAACGGTAGCAGCAGTTCTTCAACTTCAGGCATTCCAAGCAGGGGGTTGCCCAAAGTGACCACATTGCCAGTAGATATATCCCATGGAGATAAATTAGAGTCAAGTCCAAGTAATTTTAAGTTGGAAAGGTCAAAAACAGAGAGGCAGAGACATCTAAGGCCTGAGGAGGCAGCACAAATTTTTGATGACAAATGTCCTGTACATGAAAAGCTTAGATTGTTGAACAGAATAGCTACTGTAAAAGATGACGGAACTGTAGAATTTGAGGTTCCAATAGATGTTGAAACTGAAGCTCTTGGTGCTAGATCCACTCATGTAAATAATGTTATTGATGATTCACTTGGTACAACAGACCTTGATTACATTCCTCCATTGAATATAGTGATGCTTATTGTTGGTACAAGAGGAGATGTACAGCCATTTGTTGCAATCGGAAAACGCTTGCAGGATTATGGTCATCGTGTTAGATTAGCAACTCATTCCAATTTTAAGGAGTTTGTTTTGACGGCTGGGTTGGAGTTTTATCCGTTAGGGGGCGATCCAAAAGTCCTTGCTGGATATATGGTTAAAAATAAGGGCTTTCTGCCATCAGGACCCTCTGACATACCTACTCAGAGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCTGCTTGTAAAGAACCTGATATTGATTCTGGTGTCCCCTTTAAAGCAGAGGCAATCATTGCCAACCCCCCAGCATATGGGCATACTCATGTTGCAGAGGCCCTAAAAATTCCAATTCATATTTTTTTCACAATGCCTTGGACGCCAACAACTGAATTTCCTCATCCTTTGTCTCGTGTAAAGCAACAAGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCATTAATTTGGCTTGGAATACGAGACATGATTAATGATCTGAGGAAGAAAAAGTTGAAGCTACGGCCTGTCACCTATTTAAGCGGCTCACAAGGTTCTGAAACTGACATTCCTCATGCATATATATGGAGTCCTCACCTTGTTCCTAAACCAAAAGATTGGGGACCGAAAATTGATGTAGTAGGATTTTGCTTTCTTGATCTAGCATCAAACTTCGAACCGCCGGAGTCCCTTGTAAAATGGCTTGAAGATGGTGACAAGCCGATTTACATAGGGTTCGGCAGCCTGCCGGTCCAAGATCCAAAAAAGATGACACAAATAATTGTAGAAGCACTGGAGACCACAGGTCAGAGGGGCATCATCAATAAAGGATGGGGAGGTCTTGGGAATTTGACAGAACCAAAGGACTCTATATACTTGTTGGATAATATTCCTCATGATTGGTTATTTTTACACTGCAAAGCAGTGGTGCATCATGGAGGAGCAGGAACAACAGCCGCAGGGTTGAAAGCTGCGTGCCCAACGACCATAGTTCCTTTTTTTGGCGATCAACCCTTTTGGGGTGAGAGAGTGCATGATAGAGGAGTCGGTCCTCCACCTATCCCAGTTGACGAGTTTTCTCTTCCTAAGTTGATTGATGCCATAAATTTTATGCTAGATCCCAAGGTAAAGGATCATGCAATTGAACTTGCCAAGGCCATGGAAAATGAGGACGGGGTAACTGGAGCAGTGAAAGCATTTTTTAAGCAGCTTCCTCAAAAGAAACCCGAGACCGATACCGAGCCGTCTTCATCTAAAATTTTCTCTTTAAGTAGATGTTTTGGTTGTTCCTGA 1872 0.4263 MTDLPENRRRSSSDSSSSSDNSVRVEHDQGAGSVSTSKEVEESTIDVVSNGVSVNNGSSSSSTSGIPSRGLPKVTTLPVDISHGDKLESSPSNFKLERSKTERQRHLRPEEAAQIFDDKCPVHEKLRLLNRIATVKDDGTVEFEVPIDVETEALGARSTHVNNVIDDSLGTTDLDYIPPLNIVMLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSDIPTQRNQMKEIINSLLPACKEPDIDSGVPFKAEAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNFEPPESLVKWLEDGDKPIYIGFGSLPVQDPKKMTQIIVEALETTGQRGIINKGWGGLGNLTEPKDSIYLLDNIPHDWLFLHCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHDRGVGPPPIPVDEFSLPKLIDAINFMLDPKVKDHAIELAKAMENEDGVTGAVKAFFKQLPQKKPETDTEPSSSKIFSLSRCFGCS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01156 623 Gene3D Glycogen Phosphorylase B; 182 585 - -
Vivi5g01156 623 MobiDBLite consensus disorder prediction 90 107 - -
Vivi5g01156 623 Gene3D Glycogen Phosphorylase B; 411 580 - -
Vivi5g01156 623 MobiDBLite consensus disorder prediction 1 107 - -
Vivi5g01156 623 Pfam Glycosyltransferase family 28 N-terminal domain 182 325 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vivi5g01156 623 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 182 412 - -
Vivi5g01156 623 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 413 580 - -
Vivi5g01156 623 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 42 606 - -
Vivi5g01156 623 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 435 577 IPR002213 GO:0008194
Vivi5g01156 623 MobiDBLite consensus disorder prediction 11 70 - -
Vivi5g01156 623 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 181 593 - -
Vivi5g01156 623 CDD GT1_Gtf-like 180 595 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01156 Vivi-Chr5 28917032 28926511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01156 95 623 Glycosyltransferase AT3G07020 78.879 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01156 K05841 - gmx:100780970 1021.54