Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01116 ATGTCGCTATCGGATTCCGAAACCTCCTATGGCGGTGGCGGTGGATCGGACTATAAGCCGTTTCGTCATATCAGCCGCGATAGATTATTATATGAAATGCTTAGATCAGCAAAGTCTGGGGATTCAAAAGCATGGAAGGTGCTCATAATGGACAAAGTTACAGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATTACAGACCAAGAAGTTTCTTTGGTGGAAGACCTTTTCCGGAGAAGGCAACCGTTACCATCATTGGATGCTGTTTATTTCATCCAGCCTTCAAAAGAGAATGTGGTCATGTTCTTGTCTGATATGTCTGGAAGGGAGCCCCTGTACAAGAAAGCGTATATATTTTTCAGCTCACCAATCCCAAAGGAGCTTGTAAACCACATTAAATGTGATACAAGTGTCTTACCACGCATAGGTGCATTGAGAGAGATGAATTTGGAATACTTTCCGATAGATAGCCAGGGGTTTATCACTGATCAAGACACAGCACTGCAAGAACTTTATGGAAATGTTGACAACATTCGTAGATTTAATACCTACTTGAATAATATGGCGATTCGAATAGCTACAGTTTTTGCTTCATTGAAGGAGTTACCGAATGTATACTATCGTTCGGCAAAGGAAAGTGATGAGTCTTCACCAACAGTAAGTCGTGAATTAGTTCCTACCAAGCTTGCTGATGCAGTTTGGGACATGGTTTCTAAATATAAATCTACTATTCCCAAATTTCCACAAAAAGAAACATGCGACCTGATCATTGTCGATAGATCCGTTGACCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCCATGTGCCATGATTTATTGGATATGGAAGGAAATAAATACATACATGAGGTTGCTAGCAAAACAGGGGGTCCACCTGAGAATAAGGAGGTCGTTTTAGAAGAACACGATCCAGTCTGGCTCGAACTTCGCCATACACATATAGCAGATGCTAGTGAAAGATTGCATGAAAAGTTTACCAACTTTGTATCAAAGAACAAAGCAGCACAAATGCAACAAAGTGGAAGAGATGGTAGTGAAATATCGACACGGGATTTGCAAAAAATGGTTCAAGCTTTGCCCCAATACACTGAGCAAGTGGAAAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATCAACAGAATCATCAGAGACACAGATCTTCGAGAGCTTGGACAGTTGGAGCAAGATCTTGTTTTTGGGGACGCTGCAGCCAAGGACGTTATTAACTTTTTAAGAACAAAGCAGAATACAACTCCTGAATATAAGTTGCGGTTGTTGATGATCTATGCATCTGTCTACCCTGAAAAGTTTGAGGGTGATAAAGGTGTAAAGCTAATGCAGTTGGCAAAACTATCACCCGATGACATGAAAGTTATCAGTAATATGCAACTGCTGGCGGGATCTTCAACAAAGAAGGCATCTGCTGCTGGTAGTTTCTCTCTGAAGTTCAGTAACCAGAAGGCACCGCAAGCAGCACGCAAAGATCGTACTGACGAAGAGGAAGAAACATGGTCACTATTTCGATTTTATCCCGTTTTAGAGGAGCTCATTGAAAGTCTTAATAAAGGTGAACTGCCAAAGAGTGACTATGCATGTAAAAATGAACCAATTCCCGTTCCCAAAGGAAACTCTGCTCGAAGCAGCAAGAGCACTCAAACAGCAGCTCCACCTCCAACAGCTGCTCCTCATTCAATGAGATCTCGACGGACAGCCAACTGGGCTAAGTCACGTACTTCTGACGATGGGTATTCAAGTGATTCCACGTTAAAGAACGTAGCCGCTGATTTCAAGAAGATGGGAAAGAGAATCTTTGTGTTTATTATTGGCGGGGCTACTCGATCTGAGCTACGTGTTTGTCACAAACTGACAACAAAACTAAGAAGAGAAGTAATCCTAGGCACTACTTCCATGGACGATCCTGCACAATATCTTACGAAATTGAAGTTATTATGCGAGAGTAAAGCTACGCCTACGCTGGACGGCCTTGGAATATGA 2031 0.419 MSLSDSETSYGGGGGSDYKPFRHISRDRLLYEMLRSAKSGDSKAWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPSLDAVYFIQPSKENVVMFLSDMSGREPLYKKAYIFFSSPIPKELVNHIKCDTSVLPRIGALREMNLEYFPIDSQGFITDQDTALQELYGNVDNIRRFNTYLNNMAIRIATVFASLKELPNVYYRSAKESDESSPTVSRELVPTKLADAVWDMVSKYKSTIPKFPQKETCDLIIVDRSVDQIAPVIHEWTYDAMCHDLLDMEGNKYIHEVASKTGGPPENKEVVLEEHDPVWLELRHTHIADASERLHEKFTNFVSKNKAAQMQQSGRDGSEISTRDLQKMVQALPQYTEQVEKISLHVEIAGKINRIIRDTDLRELGQLEQDLVFGDAAAKDVINFLRTKQNTTPEYKLRLLMIYASVYPEKFEGDKGVKLMQLAKLSPDDMKVISNMQLLAGSSTKKASAAGSFSLKFSNQKAPQAARKDRTDEEEETWSLFRFYPVLEELIESLNKGELPKSDYACKNEPIPVPKGNSARSSKSTQTAAPPPTAAPHSMRSRRTANWAKSRTSDDGYSSDSTLKNVAADFKKMGKRIFVFIIGGATRSELRVCHKLTTKLRREVILGTTSMDDPAQYLTKLKLLCESKATPTLDGLGI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01116 676 MobiDBLite consensus disorder prediction 553 570 - -
Vivi5g01116 676 Gene3D - 568 665 IPR027482 -
Vivi5g01116 676 Gene3D - 161 544 IPR027482 -
Vivi5g01116 676 PIRSF VPS45_Sec1 16 669 IPR001619 GO:0016192
Vivi5g01116 676 Gene3D - 16 149 IPR043154 -
Vivi5g01116 676 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 32 659 IPR001619 GO:0016192
Vivi5g01116 676 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 273 396 IPR043127 -
Vivi5g01116 676 MobiDBLite consensus disorder prediction 577 598 - -
Vivi5g01116 676 MobiDBLite consensus disorder prediction 545 598 - -
Vivi5g01116 676 SUPERFAMILY Sec1/munc18-like (SM) proteins 21 662 IPR036045 -
Vivi5g01116 676 Gene3D - 397 522 - -
Vivi5g01116 676 Pfam Sec1 family 46 656 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01116 Vivi-Chr5 27928503 27939076 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01116 K15292 - gmx:100783301 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01116 5 27928503 27939076 Vivi5g01116 5 27928503 27939076 ECH