Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01112 ATGCATAGATCTGGTGCAACGATGGCTTGGAACGTGTTCAAGTTCTGCACGGCTTTGCGAGGACTTGGTTCGATTATGATTCTGTTGGTTCTTGGTGTTGTTGGGGTTACTTATTATGCTGTTGTTATTACCAATTATGTTCCTCTTATGTATAATGGAGGGTTTGATTGTCTTATTGCAATCTTCGTCTTGATCTTGTTTCATAGTTTGTTGGTTATGCTATTATGGAGTTATTTTTCTGTTGTTTTTATCGATCCGGGAAGTGTACCTCCAAATTGGAGGCCTACAATTGATGAGGAGATAGGAGAGGAAGATCCATTAGTTGGTGCAGAATTCATGAACGCGGTGTCTGATCCGTCCAATCAAAGGATTCGGTACTGCAGGAAGTGCAATCAGCTCAAGCCGCCTCGATGCCATCATTGTTCAGTTTGTGGGCGATGTGTACTGAAGATGGACCACCATTGTGTGTGGGTAGTTAACTGTGTCGGGGCCCTAAATTACAAATATTTCCTTCTTTTCTTGTTCTACACTTTCCTCGAGACGAGTCTAGTGACTGCATCCTTACTGCCGCATTTCATAGCATTCTTTAGTGATGGAGAAATTCCCGGAACACCTGGCTCTCTTGCTACAACTTTTCTTGCGTTTGTTTTGAATCTGGCTTTCGCATTGAGTGTGTTGGGATTTCTTATCTTGCACATATCATTGGTGGCTGCTAATACAACCACTATTGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGTTACGACCTTGGCCGTCGTAAAAATTTTGAGCAGGTTTTTGGGATGGACAAGAAATACTGGTTCATTCCTGCTTATTCAGAAGAAGATATACGAAGGATGCCAGCTCTACAAGGTCTCGAGTATCCATCAAAACCCGACTTCGATTCCCAATAG 918 0.4248 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVITNYVPLMYNGGFDCLIAIFVLILFHSLLVMLLWSYFSVVFIDPGSVPPNWRPTIDEEIGEEDPLVGAEFMNAVSDPSNQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETSLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLILHISLVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSEEDIRRMPALQGLEYPSKPDFDSQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01112 305 ProSiteProfiles DHHC domain profile. 125 175 - -
Vivi5g01112 305 Pfam DHHC palmitoyltransferase 121 248 IPR001594 GO:0016409
Vivi5g01112 305 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 26 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01112 Vivi-Chr5 27741730 27746145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01112 8 305 Lipid Metabolism Gene Families AT4G22750 65.000 1.03e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01112 K20028 - gmx:100794887 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01112 5 27741730 27746145 Vivi5g01112 5 27741730 27746145 ECH