Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01082 ATGATGTCCATCTCTGTCGAGGCAGCGGAGGCTCGGGATTCTTTGACGGATGACAAAGAAATTGTCAATACTTATGAGAGGTTAACAGCTTTGGATGGAAAACGAAGGTTTGCATTAGCAGCAGCAGCATCTCACAAGGAAGAAGTTGGAAGGCTGAGGGAATATTTTGAAGATGTAGATAGAACATGGGAGAACTTTGAGAAGACACTATGGGATCATGTTGCCAATTTCTATAAGCTTTCTAAAGAAAGCCCACAAACTTTGGTTCGTGCTTTACGGGTTGTTGAAATGCAAGAAATCCATGATCAACAGGTTGCAGAGGATGTAGCTGAAGCTGAAGGGGATGGTGCATTGGCATCAGCCACAAATCCTCATAGAAGTGCCATAAAATCTACAAGCGGGATGTCTTCGAAAAATTTAACACAACAAAAATTGAAGGTTCAGGGGAAAGGCTATAAGGATAAGTGTTACGAGCAAATTAGGAAGACTGTTGAAGGAAGATTTAACAAACTTCTAAATGAGCTTGTGGTTGAGGACCTGAAAGCAGCATTAGAGGAAGCTCGAGTGATTGGGGAGGAACTTGGAGATATCTATGACTATGTTGCCCCCTGCTTTCCTCCAAGATATGAAATATTTCAACTAATGGTAAATCTGTATACTGAGAGGTTTATTCAGATGCTAAGGTTGCTTAGTGACAAGGCCAATGGATTAACAAATATCGAGATATTAAAGGTAACTGGTTGGGTGGTTGAATACCAAGATAACCTGATTGGCCTTGGTGTTGACGAGTCTTTGGCCCAAGTTTGCTCTGAGAGTGGTGCAATGGATCCTCTTATGAATTCCTATGTTGAGCGAATGCAAGCTACAACAAGGAAATGGTACTTGAATATTCTGGAAGCAGATAAAACACAGCCCCCAAAGAAAACTGAAGATGGGAAGTTATACACCCCAGCTGCTGTTGATCTATTCAGGATACTTGGAGAGCAAGTTCAAATTGTCCGAGATAATAGCACTGATGTCATGTTATACCGGATTTCCTTGGCAACCATTCAGGTGATGATTGATTTTCAAGCAGCTGAAAAGAAGAGACTTCAAGAACCAGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTATGATAAACAATAATTTGCGCTGCTATGATCTTGCAATGGAGCTAAGTAATAGCACCATAGAAGCTCTTCCACAGAACTATGCAGAGCAGGTTAATTTTGAAGATACTTGTAAGGGGTTTCTCGAAGTTGCTAAGGAAGCTGTGCATCAAACAGTAAGTGTAATATTTGAAGATCCCGGTGTCCAGGAGTTGCTGGTCAAACTATACCATAAAGAATGGAGCGAGGGGCAGGTTACTGAATACTTGGTTGCAACATTTGGCGATTATTTTACTGATGTAAAAATGTACATTGAAGAAAGGTCTTTTAGGAGGTTTGTTGAAGCTTGCCTAGAGGAAACAGTTGTTGTTTATGTTGACCGTCTTTTAACACAGAAAAACTACATCAAGGAGGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTCATCATGGACTTTTTTAGGGAACATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTGTACTTAGCGACTTGAGGGAACTTGCTTCAGCAGAGAGCCTCGATACCTTCACACTCATCTATACAAATATACTCGAACATCAACCTGACTGCCCGCCTGAAGTTGTTGAGAAACTTGTCGGTCTACGAGAAGGAATTCCTCGAAAGGATGCCAAGGAGGTCATACAAGAGTGCAAAGACATATATGAAAATTCTCTTATTGATGGAAGACCTCCAAAGACAGGTTTTGTTTTCCCCCGGGTGAAGTGCTTAACTGCTTCAAAGGGTGGACTTTGGCGTAAACTCACTTGA 1908 0.413 MMSISVEAAEARDSLTDDKEIVNTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVDRTWENFEKTLWDHVANFYKLSKESPQTLVRALRVVEMQEIHDQQVAEDVAEAEGDGALASATNPHRSAIKSTSGMSSKNLTQQKLKVQGKGYKDKCYEQIRKTVEGRFNKLLNELVVEDLKAALEEARVIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDKANGLTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILEADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAAEKKRLQEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQVTEYLVATFGDYFTDVKMYIEERSFRRFVEACLEETVVVYVDRLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKDIYENSLIDGRPPKTGFVFPRVKCLTASKGGLWRKLT 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01082 635 Pfam Exocyst complex component Sec6 56 615 IPR010326 GO:0000145|GO:0006887
Vivi5g01082 635 Gene3D - 447 613 IPR042532 -
Vivi5g01082 635 Gene3D - 272 441 - -
Vivi5g01082 635 FunFam Exocyst complex component SEC6 272 441 - -
Vivi5g01082 635 FunFam Exocyst complex component SEC6 447 620 - -
Vivi5g01082 635 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 1 622 IPR010326 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01082 Vivi-Chr5 26768668 26789940 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01082 K06110 - gmx:100799529 1174.84