Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01081 ATGATGATGGCGGAGGATCTCGGTGTGGAAGCGAAGGAAGCATCTGTTCGCGAGGTCGCGAAGCTGTTACCTCTTCCGGAGCTTCTTCATTCAATTGCATCGATCAAAGCTGATTACGTTTCACGCCAACAGGCCAATGACGCACAGCTTAGTACAATGGTTGCAGAGCAGGTTGAGCAGTCACAGGCAGGACTGAAATCACTCTCCTTTTCTGAGAAGACAATAAATCAGCTCCGGGAAAACTTTCTCTCCATTGAGAATTTATGTCAGGAATGCCAAACATTAATTGACAACCATGACCAGATAAAGATACTTAGCAATGCAAGAAATAACTTAAACACAACCTTGAAGGATGTTGAAGGTATGATGTCCATCTCTGTCGAGGCAGCGGAGGCTCGGGATTCTTTGACGGATGACAAAGAAATTGTCAATACTTATGAGAGGTTAACAGCTTTGGATGGAAAACGAAGGTTTGCATTAGCAGCAGCAGCATCTCACAAGGAAGAAGTTGGAAGGCTGAGGGAATATTTTGAAGATGTAGATAGAACATGGGAGAACTTTGAGAAGACACTATGGGATCATGTTGCCAATTTCTATAAGCTTTCTAAAGAAAGCCCACAAACTTTGGTTCGTGCTTTACGGGTTGTTGAAATGCAAGAAATCCATGATCAACAGGTTGCAGAGGATGTAGCTGAAGCTGAAGGGGATGGTGCATTGGCATCAGCCACAAATCCTCATAGAAGTGCCATAAAATCTACAAGCGGGATGTCTTCGAAAAATTTAACACAACAAAAATTGAAGGTTCAGGGGAAAGGCTATAAGGATAAGTGTTACGAGCAAATTAGGAAGACTGTTGAAGGAAGATTTAACAAACTTCTAAATGAGCTTGTGGTTGAGGACCTGAAAGCAGCATTAGAGGAAGCTCGAGTGATTGGGGAGGAACTTGGAGATATCTATGACTATGTTGCCCCCTGCTTTCCTCCAAGATATGAAATATTTCAACTAATGGTAAATCTGTATACTGAGAGGTTTATTCAGATGCTAAGGTTGCTTAGTGACAAGGCCAATGGATTAACAAATATCGAGATATTAAAGGTAACTGGTTGGGTGGTTGAATACCAAGATAACCTGATTGGCCTTGGTGTTGACGAGTCTTTGGCCCAAGTTTGCTCTGAGAGTGGTGCAATGGATCCTCTTATGAATTCCTATGTTGAGCGAATGCAAGCTACAACAAGGAAATGGTACTTGAATATTCTGGAAGCAGATAAAACACAGCCCCCAAAGAAAACTGAAGATGGGAAGTTATACACCCCAGCTGCTGTTGATCTATTCAGGATACTTGGAGAGCAAGTTCAAATTGTCCGAGATAATAGCACTGATGTCATGTTATACCGGATTTCCTTGGCAACCATTCAGGTGATGATTGATTTTCAAGCAGCTGAAAAGAAGAGACTTCAAGAACCAGCTTCTGAAATTGGTCTGGAACCTTTATGTGCTATGATAAACAATAATTTGCGCTGCTATGATCTTGCAATGGAGCTAAGTAATAGCACCATAGAAGCTCTTCCACAGAACTATGCAGAGCAGGTTAATTTTGAAGATACTTGTAAGGGGTTTCTCGAAGTTGCTAAGGAAGCTGTGCATCAAACAGTAAGTGTAATATTTGAAGATCCCGGTGTCCAGGAGTTGCTGGTCAAACTATACCATAAAGAATGGAGCGAGGGGCAGGTTACTGAATACTTGGTTGCAACATTTGGCGATTATTTTACTGATGTAAAAATGTACATTGAAGAAAGGTCTTTTAGGAGGTTTGTTGAAGCTTGCCTAGAGGAAACAGTTGTTGTTTATGTTGACCGTCTTTTAACACAGAAAAACTACATCAAGGAGGAAACTATTGAACGGATGAGGCTAGATGAGGAGGTCATCATGGACTTTTTTAGGGAACATATCAGTGTTTCTAAAGTTGAAAACAGAGTGAGTGTACTTAGCGACTTGAGGGAACTTGCTTCAGCAGAGAGCCTCGATACCTTCACACTCATCTATACAAATATACTCGAACATCAACCTGACTGCCCGCCTGAAGTTGTTGAGAAACTTGTCGGTCTACGAGAAGGAATTCCTCGAAAGGATGCCAAGGAGGTCATACAAGAGTGCAAAGACATATATGAAAATTCTCTTATTGATGGAAGACCTCCAAAGACAGGTTTTGTTTTCCCCCGGGTGAAGTGCTTAACTGCTTCAAAGGGTGGACTTTGGCGTAAACTCACTTGA 2271 0.4179 MMMAEDLGVEAKEASVREVAKLLPLPELLHSIASIKADYVSRQQANDAQLSTMVAEQVEQSQAGLKSLSFSEKTINQLRENFLSIENLCQECQTLIDNHDQIKILSNARNNLNTTLKDVEGMMSISVEAAEARDSLTDDKEIVNTYERLTALDGKRRFALAAAASHKEEVGRLREYFEDVDRTWENFEKTLWDHVANFYKLSKESPQTLVRALRVVEMQEIHDQQVAEDVAEAEGDGALASATNPHRSAIKSTSGMSSKNLTQQKLKVQGKGYKDKCYEQIRKTVEGRFNKLLNELVVEDLKAALEEARVIGEELGDIYDYVAPCFPPRYEIFQLMVNLYTERFIQMLRLLSDKANGLTNIEILKVTGWVVEYQDNLIGLGVDESLAQVCSESGAMDPLMNSYVERMQATTRKWYLNILEADKTQPPKKTEDGKLYTPAAVDLFRILGEQVQIVRDNSTDVMLYRISLATIQVMIDFQAAEKKRLQEPASEIGLEPLCAMINNNLRCYDLAMELSNSTIEALPQNYAEQVNFEDTCKGFLEVAKEAVHQTVSVIFEDPGVQELLVKLYHKEWSEGQVTEYLVATFGDYFTDVKMYIEERSFRRFVEACLEETVVVYVDRLLTQKNYIKEETIERMRLDEEVIMDFFREHISVSKVENRVSVLSDLRELASAESLDTFTLIYTNILEHQPDCPPEVVEKLVGLREGIPRKDAKEVIQECKDIYENSLIDGRPPKTGFVFPRVKCLTASKGGLWRKLT 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01081 756 Gene3D - 393 562 - -
Vivi5g01081 756 Gene3D - 568 734 IPR042532 -
Vivi5g01081 756 PANTHER EXOCYST COMPLEX COMPONENT SEC6-RELATED 2 743 IPR010326 GO:0000145|GO:0006887
Vivi5g01081 756 FunFam Exocyst complex component SEC6 568 741 - -
Vivi5g01081 756 FunFam Exocyst complex component SEC6 393 562 - -
Vivi5g01081 756 Pfam Exocyst complex component Sec6 177 736 IPR010326 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01081 Vivi-Chr5 26766578 26789940 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01081 K06110 - gmx:100799529 1393.25