Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01065 ATGGAAATTGGTATGCTACCAATCTCTGCATCAAAGAGAGGAAAACTCTTAGCCGCCGGTTACACAACACTCCTCGCCATTTCTCGCACTTCCACCACTCACCTTGCTCGAGATATAGAAGTTTCTGAGAATGAAGCTTCAGAGATTCTGAAATTTGCAACTAAAACTAGGGTTTTGGATGGATCAAGTGGGAGTAACACTAATATTATTGATGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAGAGATTTTCTTCTCTCATTACCACTTCTTGTGTTGATCTAGATAACATACTTGGCGGAGGAATTAGTTGCAAAGAAGTTACTGAAATAGGTGGAGTCCCGGGCATCGGTAAAACCCAAATAGGGATTCAACTTGCGGTAAATGTTCAGATTCCACTAGACTATGGTGGTCTAGGTGGGAAGGCAATATACATTGACACCGAGGGAAGCTTTATGGTTGAACGTGTTCTACAAATTGCGGAAGCATGCATAGAAGACATGTCCGAATATAGCCACCACTTTCACAAAGATAATCAAGCTTATGGAGTTAAAATGCACCCGAATAGTATCTTGGAAAATATATTCTATTTTCGTGTTTGCAGCTATACTGAACAAATTGCTTTGGTGAATTACTTGGACAAATTCGTCACGGAACATAAAGATGTAAAGATCATCATTATCGACAGTGTTACTTTCCATTTCCGCCAAGACTTTGACGACATGGCTCTCCGAACTCGATTACTCGGTGAAATGTCTTTAAAGTTGATGAAGCTTGCAAGAAACTTTTCTTTGGCGGTTGTTATGTTAAATCAAGTTACAATCAAGCATATTGAAGGTTCATTTCAATTGACCCTTGCACTAGGTGATAGCTGGTCGCATTCTTGCACAAACCGGATCATCTTATATTGGAATGGCGATGAAAGACATGCATATATTGACAAGTCTCCTTCTCTTAAATCAGCTTCAGCACCATATTCTGTGACTTCTAGGGGGATACGTAATTGTAATTCTACTTCCAACAGTAAAAGAATCAAGACAGTGTAA 1050 0.399 MEIGMLPISASKRGKLLAAGYTTLLAISRTSTTHLARDIEVSENEASEILKFATKTRVLDGSSGSNTNIIDGGQTAWDMLNEERFSSLITTSCVDLDNILGGGISCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAYGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFDDMALRTRLLGEMSLKLMKLARNFSLAVVMLNQVTIKHIEGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNCNSTSNSKRIKTV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01065 349 CDD Rad51C 107 318 - -
Vivi5g01065 349 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 344 - -
Vivi5g01065 349 FunFam DNA repair protein RAD51 72 338 - -
Vivi5g01065 349 Gene3D - 69 338 IPR027417 -
Vivi5g01065 349 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Vivi5g01065 349 PIRSF Rad51 1 340 IPR016467 -
Vivi5g01065 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
Vivi5g01065 349 Pfam Rad51 75 337 IPR013632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01065 Vivi-Chr5 26101295 26104839 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01065 K10870 - qsu:112016681 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01065 5 26101295 26104839 Vivi5g01065 5 26101295 26104839 ECH