Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01055 ATGTCAATGATAGTGCGCAGAGGTATCCATTGCATGCAGAGACTGAATTCAGCGAGTGTATCCGCTGCATTGCTAGAGAATGGACAAAATCGTGTAATTGATGCTTCACTTACTCTTATTAGAGAAAGAGCAAAGCTTAAGGGAGAACTTGTGCGAGCTTTGGGAGGTGCTGTTGCAACTTCATCGCTTCTTGGAGTTCCTTTGGGACACAATTCATCATTCCTTCAAGGGCCTGCATTTGCGCCACCTCGCATTAGGGAGGCCATTTGGTGTGGTAGCACAAACTCAACAACCGAAGAAGGTAAGGATTTAAAAGACGCACGAGTGCTAACTGATGTCGGTGATGTCCCTATTCAAGAAATTCGAGATTGTGGCGTAGATGATAAAAGATTGATGAGTGTCATTGGCGAATCTGTCAAGTTAGTGATGGAAGAGGCTCCACTAAGACCCTTAGTTTTAGGTGGTGATCACTCAATATCATTTCCGGTTATTCGAGCTGTCTCTGAGAAGCTTGGAGGACCGGTAGATGTTCTTCATATTGATGCGCATCCTGACAACTACGATGCATATGAAGGAAATATTTATTCGCACGCTTCTTCTTTTGCTCGTGTCATGGAGGGTGACTATGTTCGGCGACTCTTGCAGGTTGGTATTCGATCAATATCAGCTGAAGGACGTGCACAAGCGAAAAAATTTGGGGTCGAGCAATATGAAATGCGAACGTTTTCCAGAGATCGCCCCTTCCTAGAGAACCTGAAACTAGGGGAAGGTGTGAAAGGGGTGTATATCTCAATAGACGTCGATTGTCTCGATCCTGCATTTGCTCCAGGAGTGTCTCACATTGAACCGGGAGGTCTTTCTTTCCGCGATGTTCTTAACATCCTACACAATCTTCAAGGCGATGTTGTTGGTGGAGACGTCGTTGAATTCAACCCACAACGCGATACCGTTGATGGAATGACTGCTATGGTAGCTGCTAAGTTGGTCAGAGAACTGGCCGCAAAGATTGCAAAATGA 1017 0.4543 MSMIVRRGIHCMQRLNSASVSAALLENGQNRVIDASLTLIRERAKLKGELVRALGGAVATSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKDLKDARVLTDVGDVPIQEIRDCGVDDKRLMSVIGESVKLVMEEAPLRPLVLGGDHSISFPVIRAVSEKLGGPVDVLHIDAHPDNYDAYEGNIYSHASSFARVMEGDYVRRLLQVGIRSISAEGRAQAKKFGVEQYEMRTFSRDRPFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVGGDVVEFNPQRDTVDGMTAMVAAKLVRELAAKIAK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01055 338 Gene3D Ureohydrolase domain 55 338 - -
Vivi5g01055 338 FunFam Arginase 1, mitochondrial 51 338 - -
Vivi5g01055 338 Pfam Arginase family 62 332 IPR006035 GO:0046872
Vivi5g01055 338 CDD Agmatinase-like_2 63 333 - -
Vivi5g01055 338 ProSiteProfiles Arginase family profile. 52 338 IPR006035 GO:0046872
Vivi5g01055 338 ProSitePatterns Arginase family signature. 264 285 IPR020855 GO:0016813|GO:0046872
Vivi5g01055 338 PANTHER ARGINASE/AGMATINASE 3 338 IPR006035 GO:0046872
Vivi5g01055 338 SUPERFAMILY Arginase/deacetylase 62 335 IPR023696 -
Vivi5g01055 338 PIRSF Arginase 56 338 IPR006035 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01055 Vivi-Chr5 25954308 25957622 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01055 K01476 - gmx:100778423 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01055 5 25954308 25957622 Vivi5g01055 5 25954308 25957622 ECH