LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g01006	ATGTTACCTTCTTCCACCATACCTTCATGGCCTCCTCGTAGCTCAATTCCCATTTCACTCTCTTTCAAATCAAGATTAACCTCATTGAATCCTCAATTTCGTGCTGCTTTGGTTGAAGCAAAACCATCACCTAATTCCCTCGAGGTTCCTTCTCTTCCAATTGATCGTGCTGATGACATTCAAGCTGAGACAAAAGCTATGGCTCGTGCTGTTAATGCTTCTGTTTATACCCCCGAACTTGTTGCTTCAAGATATGGTTCAAAACCCTTCAAGGTTGTTGGAAGGGCATTTGAGATTGTGTTTAGTTTAGGGTCTTTTGGGTTGAAGCTATTGTGGGAGCAAAGGAATGGAGTTGGTGATAAGAATAAGAGGGTTCGTGCTATTGAGCTTAGGACTATATTCACTAAGCTTGGACCAACTTTTGTCAAATTGGGTCAAGGGTTGTCTACTAGACCTGATATTTGTCCAATTGAGTATCTCGAAGAGCTTTCGGAACTTCAAGATGGTTTGCCGACATTTCCTGACGACGACGCCTTCGAATGCATCGAGAGGGAATTAGGATTATCTCTCGACTCTATTTTTTCTACGATATCTCCTTCGCCTATAGCCGCTGCTAGTTTAGGTCAGGTTTATAAAGCTCAGTTAAAGTACTCTGGCAAAGTTGTTGCGGTCAAGGTGCAACGCCCAGGGATTGAAGAAGCTATTGGATTGGACTTCTACCTCATAAGAGGTTTAGGGTTTCTGATAAATAAATACGTGGATCGAATCACAACCGATGTTGTTGCACTTATAGACGAGTTTGCTTGTAGAGTCTTTCAAGAGCTCAACTATGTGCAGGAGGGAAAAAATGCGAAGAGATTCAAAAAATTGTATGCCGACAAGGAAGAAATTTTAGTTCCCGATGTTTTCTGGGACTATACGAGTGCGAAGGTGCTAACGATCGATTGGGTTGATGGTGTAAAACTTAACGAGCAAGAAGCAATTGAGAGGCAGGGACTAAATGTGTTGGATCTGGTAAACACCGGCATACAGTGCAGTCTCAGACAACTTCTCGAGTACGGGTATTTCCATGCAGATCCTCATCCTGGTAATCTTTTGGCTACACCCGAGGGAAAACTCGCTTTTCTTGATTTCGGGATGATGAGTGAGACTCCTGAAGAAGCGAGATATGCGATAATCGGTCACGTTGTTCACTTGGTTAACCGAGATTACGAAGCTATGGCTCAAGACTACTATGCTCTTGATTTCTTATCTAGGGATGTTGATGTGTCCCCAATTGTTCCCGCACTTCGAAACTTTTTTGACGATGCACTTGATTATACCGTTAGTGAGCTTAACTTCAAGACAATTGTGGATGGTCTCGGAAACGTTTTGTATCAATATCCATTCAATGTTCCGGCATACTATGCATTGATATTAAGGTCTCTGACAGTTTTAGAAGGTTTAGCACTATACGCCGATCCGAATTTTAAGGTGCTTGCCGCATCGTATCCATATTTTGCTAAAAGGCTCTTAACAGATCCAAATCCATATCTAAGGGATGCTCTTATTGAGTTACTTTTCAAGGATGGCAAGTTCAGGTGGAATAGGCTCGAAAACCTTCTAGTTCAGGGAAGAAAAGATCGAGATTTCTCCGCTAAAGAAGCTTTACAACCAGCCTTAAAGGTACTGTTGAGTCCCGACGGTGAAGTTCTAAGGAATCTAGTTATCAAAGAAGCCGTTCGTGTATCCGAAGCTTTCACTCTTGGCACAATTTCCGACACATACCAGTATGTTCCCGCCTTTTTGAAGACCCTTGTCTTAAATGGTTCTGCAAAGGAGCCACTTCTGACGTCAGAAACCGAACGGCAAAACATGATAGAGCTTAGAGATCAAGTTATTAGGATATGGAGACTTTTGCAATCCTCTAATGATTTTGATCCGTCGATTTTGCTACCGCTACTTCAGGTTGTTCAGCAACCGGAGGCTCGTAGACTTGGGGGGCGTGTTGTAGGCGGAATCACTCAACGACTCGCAGCGCGATTTCTTCTGCAAGTACTCGGAGCACCAAATTCAGCTTCTACATAG	2067	0.4301	MLPSSTIPSWPPRSSIPISLSFKSRLTSLNPQFRAALVEAKPSPNSLEVPSLPIDRADDIQAETKAMARAVNASVYTPELVASRYGSKPFKVVGRAFEIVFSLGSFGLKLLWEQRNGVGDKNKRVRAIELRTIFTKLGPTFVKLGQGLSTRPDICPIEYLEELSELQDGLPTFPDDDAFECIERELGLSLDSIFSTISPSPIAAASLGQVYKAQLKYSGKVVAVKVQRPGIEEAIGLDFYLIRGLGFLINKYVDRITTDVVALIDEFACRVFQELNYVQEGKNAKRFKKLYADKEEILVPDVFWDYTSAKVLTIDWVDGVKLNEQEAIERQGLNVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARYAIIGHVVHLVNRDYEAMAQDYYALDFLSRDVDVSPIVPALRNFFDDALDYTVSELNFKTIVDGLGNVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIELLFKDGKFRWNRLENLLVQGRKDRDFSAKEALQPALKVLLSPDGEVLRNLVIKEAVRVSEAFTLGTISDTYQYVPAFLKTLVLNGSAKEPLLTSETERQNMIELRDQVIRIWRLLQSSNDFDPSILLPLLQVVQQPEARRLGGRVVGGITQRLAARFLLQVLGAPNSAST	688

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi5g01006	688	PANTHER	CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED	56	677	-	-
	Vivi5g01006	688	CDD	ABC1_ADCK3-like	166	409	-	-
	Vivi5g01006	688	ProSiteProfiles	Protein kinase domain profile.	196	526	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi5g01006	688	Pfam	ABC1 atypical kinase-like domain	165	409	IPR004147	-
	Vivi5g01006	688	SUPERFAMILY	Protein kinase-like (PK-like)	167	407	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g01006	Vivi-Chr5	24187150	24191649	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g01006	K08869		-	gmx:100802848	1088.94