Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00996 ATGGCGAAACGCAAGAAATCCGAATCCAGTTCACAATCGGCGGGTAACGGGAGCACCATATCTGAGTATGAGGAACAAAGACTCCGGAGAATCGCAGAAAACCAAGCGAGGTTAAAGGCATTGGGGTTACCCCAAATGGTCTCTTCCTTGAAAACCTGGCCTCAGATTAAGCAATTGAAGAAGAAGGGAAAGGAAAAGGTTGAAGATGATGATGATGAAGAGTATGAACCCGAAAATGAAGAGGAACGGGAAACTGAATCAGATTCTTCCAGTGAACATGAATCTGAGTTTGAAAATGCTTCTGGGTCACGGAAAAAGAAGGCGAAGAGCAAAAGTTTGAAGGTGAAAAGTAGAGTAACCGCAACCGGAAAGAAGCACGGTGGTAATTTAAAATATGTTGATGAAGAAGAAGAAGCTTGGATGCAGGCAATTGCTCTTTCTCTGCAAAAGTCTGCGGAGCCTTCAGTTTGCTCTAACACGAATGTAGGGAACATCAGCAAGGCTGAGAAAAAGGAAAACATTAACATTCAAGAAGATAAGGAACGAAAGAACAAAAAATCGTTTATTAGTCGGCTGCAAATGACCGAGGATGAACTCATTGTACACTTTTTCCAGCTTGATGAAGCAGGAAAAGGAACCGTAACAATAAGGGATTTAGAAAGAGCGGCTATAACTCATGATTTTTCATGGACAGACACTGAGTTGGTTGATATGATTCGTTGCTTTGATAGTGATGGAGATGGAAGGCTAAGTCTAGACGATTTTCGCAAGATTGTTGTTCGATGCAACATGATAAAAGACTCACAGAATTCTTGA 816 0.4154 MAKRKKSESSSQSAGNGSTISEYEEQRLRRIAENQARLKALGLPQMVSSLKTWPQIKQLKKKGKEKVEDDDDEEYEPENEEERETESDSSSEHESEFENASGSRKKKAKSKSLKVKSRVTATGKKHGGNLKYVDEEEEAWMQAIALSLQKSAEPSVCSNTNVGNISKAEKKENINIQEDKERKNKKSFISRLQMTEDELIVHFFQLDEAGKGTVTIRDLERAAITHDFSWTDTELVDMIRCFDSDGDGRLSLDDFRKIVVRCNMIKDSQNS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00996 271 ProSitePatterns EF-hand calcium-binding domain. 243 255 IPR018247 -
Vivi5g00996 271 MobiDBLite consensus disorder prediction 69 85 - -
Vivi5g00996 271 SUPERFAMILY EF-hand 187 263 IPR011992 -
Vivi5g00996 271 ProSiteProfiles EF-hand calcium-binding domain profile. 230 265 IPR002048 GO:0005509
Vivi5g00996 271 MobiDBLite consensus disorder prediction 7 22 - -
Vivi5g00996 271 SMART efh_1 234 262 IPR002048 GO:0005509
Vivi5g00996 271 MobiDBLite consensus disorder prediction 1 23 - -
Vivi5g00996 271 MobiDBLite consensus disorder prediction 42 127 - -
Vivi5g00996 271 MobiDBLite consensus disorder prediction 106 121 - -
Vivi5g00996 271 Gene3D - 150 270 - -
Vivi5g00996 271 MobiDBLite consensus disorder prediction 86 105 - -
Vivi5g00996 271 Pfam EF-hand domain pair 198 259 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00996 19 268 EF-hand Containing Proteins AT1G73440 39.841 6.48e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00996 - - vvo:131639791 376.326