Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00985 ATGGGACAAAGGTTTTCTATTTCTTCTGACTCACCGGATTCCTCCAATTGTGGTTCTGAACTTTTAGGAGGGGATTATGTAAAATTAAAACCACAAGAAGACTATAATACTCCTCTCAAGATAAACCCCAAGGAGCTGCACTTTCCATTTGAATTGAAAAAGAAGAGCTCATGCACTTTGCAGCTATCTAATGATTCCGATGATTATGTGGCTTTCAAGATTAGGGCTTCAAATCGAAAGAATTATAGTATTAGTCCAAATCACATTGGAGTTGTGTTGCCTAGTTCTACTTGTGTTATCACAGTTACAATGCGAGGGAAAAAGGAAGCACCTCTTGACATGCAATACAAAGATAAGATTATCATTCGAAGCATAGTTGCAAAGGATGAAACAATCGTAAAAAATATCACTTCAGAAATGTTTTACAAAGATTCCGGCTATGAGGTTAAAGAATGCAGATTGAAAATTGTTTATGTCGCTCCTCCTCAATGA 492 0.3659 MGQRFSISSDSPDSSNCGSELLGGDYVKLKPQEDYNTPLKINPKELHFPFELKKKSSCTLQLSNDSDDYVAFKIRASNRKNYSISPNHIGVVLPSSTCVITVTMRGKKEAPLDMQYKDKIIIRSIVAKDETIVKNITSEMFYKDSGYEVKECRLKIVYVAPPQ 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00985 163 Gene3D Immunoglobulins 32 163 IPR013783 -
Vivi5g00985 163 FunFam Vesicle-associated protein 1-1 34 162 - -
Vivi5g00985 163 Pfam MSP (Major sperm protein) domain 39 142 IPR000535 -
Vivi5g00985 163 SUPERFAMILY PapD-like 31 162 IPR008962 -
Vivi5g00985 163 ProSiteProfiles Major sperm protein (MSP) domain profile. 38 159 IPR000535 -
Vivi5g00985 163 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 39 162 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00985 Vivi-Chr5 23351722 23353329 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00985 - - tpra:123924150 159.844