Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00977 ATGAAATTTGGGAAGAGATTGAAGCAACAAGTTCAAGACACTTTGCCTGAATGGAGAGACAAGTTTTTGTCATATAAAGAGTTGAAGAAACTTTTGCGACTTTTATCGACGGCACCAAGTTCTTTGCTAAATGGTTCGGTTGGTTATGGGAAAGGTGAAGCTGAGTTTATGTATTTGTTGAATAATGAGATTGATAAATTCAATGGATTCTTCATGGAACAAGAGGAAGATTTCATTATCCGACACAAGGAAGTACAACAGAGAATCAAGAGAGTAGTTGATTTATGGGGACCAAATGGTACTCAAGCTTCTGAAGAAGATTATAAGGATGAAATGGAAAAAATTAGAAAAGCTATTGTTGATTTTCATGGTGAAATGGTTCTCTTAGTAAATTACAGCAACATTAATTATACAGGATTGGCTAAAATTTTGAAAAAGTATGATAAGAGAACTGGAGGTTTACTTCGCTTACCATTCATTCAAAAAGTATTGGAGCAACCCTTTTTCACAACCGATTTAATTTCAAAACTCGTGAAAGAATGCGAAAGCATAATTGACGCAGTGTTTCCGGTTGAAGAAGAAGGTGAAAGAGCAAGAGAAGAAATTGTAGTAGCTGGTGAAGGGATTTTCAGAAACACTGTTGCAGCTTTACTTACAATGCAAGAAATGAGAAAAGGAAGTTCAACACAAAGTGCTTTTTCTTTGCCTCCTCTCAATTTGCCAGATTCTGATCTCATTCAATCAATACAGCTTAATGCTGCTGTTCCAATTGTTTAG 777 0.3552 MKFGKRLKQQVQDTLPEWRDKFLSYKELKKLLRLLSTAPSSLLNGSVGYGKGEAEFMYLLNNEIDKFNGFFMEQEEDFIIRHKEVQQRIKRVVDLWGPNGTQASEEDYKDEMEKIRKAIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECESIIDAVFPVEEEGERAREEIVVAGEGIFRNTVAALLTMQEMRKGSSTQSAFSLPPLNLPDSDLIQSIQLNAAVPIV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00977 258 CDD SPX_AtSPX1_like 2 150 - -
Vivi5g00977 258 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 240 IPR031142 GO:0016036
Vivi5g00977 258 ProSiteProfiles SPX domain profile. 1 161 IPR004331 -
Vivi5g00977 258 Pfam SPX domain 1 33 IPR004331 -
Vivi5g00977 258 Pfam SPX domain 100 162 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00977 Vivi-Chr5 23136752 23139176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00977 - - gmx:100778590 439.113