Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00969 ATGGATTCCACCGCCGTCTCCCACGCTGATGAGTCGATCGTGTATTCTGCCGCCGTCTCCCACGCTGATCACTCCATCATTGATAAGGGAAACAATTCCGTCATTGCATCATGGTTTCAATCCATCACCACCCACCCTGGTCCGATGTGTCCGATGTGTATGGAAAACAATCCCGTCATTGCATCATGGTTTGAAGCCATCACCACCGACTCCGACTCCCACCCTGGTCCGATGTGTATGGAAAACAATCCCGTCATTGCATCCGACTCCCACCCTGGTGGTCCGATGTGTTTGGAAAACAATCCTGTCACTGCATCATGGTTTCAATCCATCACCACCGACTCCGACTCCCACACTATGGAAAACAATCCGTCTGAATCAAAAATGGATATATTTGTGGCAAATGATAAAACCATCGCTGTCTCCCTCCCTGATCCGATCGCTGTCTCCCTCCCTTATCCGATGGATAAGGGAAACAATTCTTCCGAATCAAAGATGGATGAATCCGTGGATAAGGGAACCAAGTCCTCCGAATCAAATATGGATGAACCCGTGGATAAGGGAACCAAGTCCTCCGAATCAAATATGGATGAATCCGTGGATAAGGGAACCGAGTCCTCCGATTCAAATATGGATAAATCCTTGTATAAAGGAACCAAGTCCTCCGGATCAAAGGTTAAGGAGTTGACGGAACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTGCTGAAACAGTTTTTGGCAGATCGAAGCCTTGACCAGTCCTACTCTGGTGGCTTAAGTTCTTACTGTTTGGTACTACTAATTATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGGCCGATCAACCAAAATTACGGAAGTCTTATGGTTGATTTTCTTTATTTTTTTGGGAATGTGTTTGATCCCCGTCAAATGCGGATATCAGTGCAAGGAAGTGGACTTTATATAAAAAGAGAAAGAGGTTGCAGCATTGATCCAATTCACATAGATGATCCTCTTTTTCCAACAAATAATGTGGGAAGGAATTGCTTCAGAATCCATCAATGTATTAAGGCATTTTCAGAAGCTTATATTGTTCTTGAAAATGAACTGACGCTCATAAATGGTGATGGCGAGTCATGCTCGAAACCATCTTACAGACTGCTTCCAAAAATAATCTCTAGTCTTGATGTATCGTAA 1185 0.4439 MDSTAVSHADESIVYSAAVSHADHSIIDKGNNSVIASWFQSITTHPGPMCPMCMENNPVIASWFEAITTDSDSHPGPMCMENNPVIASDSHPGGPMCLENNPVTASWFQSITTDSDSHTMENNPSESKMDIFVANDKTIAVSLPDPIAVSLPYPMDKGNNSSESKMDESVDKGTKSSESNMDEPVDKGTKSSESNMDESVDKGTESSDSNMDKSLYKGTKSSGSKVKELTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLMVDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYIVLENELTLINGDGESCSKPSYRLLPKIISSLDVS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00969 394 Gene3D - 204 389 - -
Vivi5g00969 394 SUPERFAMILY PAP/OAS1 substrate-binding domain 234 366 - -
Vivi5g00969 394 PANTHER POLY(A) RNA POLYMERASE 225 389 IPR045862 GO:0043631|GO:1990817
Vivi5g00969 394 MobiDBLite consensus disorder prediction 148 221 - -
Vivi5g00969 394 MobiDBLite consensus disorder prediction 161 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00969 Vivi-Chr5 22771004 22779336 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00969 - - vvo:131601451 802.357