Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00945 ATGGCAAACTTGAGAGTTTCTTGTGTGGTTGCATTGATGTGCATGGTGGTTATTACTGCACCAATAGCAGTAACTTCAGTCTCATGCATTAAGGTAAGTGTTTACCTTACTCCATGCCTTTCTTATCTTAAGGGAGGCAGTGGTCCCTCGAAACTATGCTGCTTTGGAGCAAAGAAGCTTAACGGGACGGCTGGCACTACCGCCGACCGTCAGGCTACTTGCAAATGCTTGAAGAGTGCTGCTGGTTTCGTTTCTGGTTTGAATGACACCAACGCGGGTACTCTCTCTGCTAAATGCGATCTTAACCTTCCCTATAAGTTTGGCCCTGATACCGATTGTAGTGGCATCACTCTCTAA 357 0.465 MANLRVSCVVALMCMVVITAPIAVTSVSCIKVSVYLTPCLSYLKGGSGPSKLCCFGAKKLNGTAGTTADRQATCKCLKSAAGFVSGLNDTNAGTLSAKCDLNLPYKFGPDTDCSGITL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00945 118 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Vivi5g00945 118 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
Vivi5g00945 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 7 114 IPR000528 GO:0006869|GO:0008289
Vivi5g00945 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 116 IPR036312 -
Vivi5g00945 118 SMART aai_6 29 113 IPR016140 -
Vivi5g00945 118 CDD nsLTP1 27 114 - -
Vivi5g00945 118 Gene3D - 27 117 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00945 Vivi-Chr5 21012000 21012840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g00945 1 114 Acyl Lipid Metabolism Gene Families AT4G33355 38.793 1.82e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00945 - - psat:127104602 221.09