Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00926 ATGGAGGGCAAAATGGGGTTTTTGTTTCTGATTGTGTTGGGTGCTGCTTGGGTTTGTGATGCAAGAGAATTAGTAAACCTTGAATTACACAGAAAACCAGACTTGTGTTCAGCTTGTGAAGAATATTCAACTCAGGTACTTGATTATCTAAAGGATAACAACACTCAGGTAGAAATCATTGATTCACTTCGCAATACATGCCTTCAACTCCGGTCTTTAAACCAGCAGTGCGGTAAATTGGTGGATTATTACGCTCCACTTTTCTTCTCAGAAATAGCTCAAATAAAGCCTGGTGAACTCTGCGAGAAGTTCAACCTTTGTGAGTCTGCGAAGGTTTTTTGGAAAGTTCAAAGAAATAGCTGTGGCCTTTGCAAAGAAGCTATTGAAGCCTTATTGGTTGAGTTGAATGATCCTGACACTAAGCTCGAGATACTAGAGAAACTACTGAAGGCATGCGATTCTGTGGAGAAGTACAAGAAGGAGTGCAAGAGGGCGGTTTTCGAGTATGGACCTTTGATTCTGGCGAATGCAGAGAAGTTCCTGAAGACAACAGATATATGCACTGCATTACATGCCTGCCCTGCTTCCACTATTGTTAGTCAGGAAGCTACAACCATGGAAGAAACACCATTGCTTTCTGACTCTTGA 648 0.4182 MEGKMGFLFLIVLGAAWVCDARELVNLELHRKPDLCSACEEYSTQVLDYLKDNNTQVEIIDSLRNTCLQLRSLNQQCGKLVDYYAPLFFSEIAQIKPGELCEKFNLCESAKVFWKVQRNSCGLCKEAIEALLVELNDPDTKLEILEKLLKACDSVEKYKKECKRAVFEYGPLILANAEKFLKTTDICTALHACPASTIVSQEATTMEETPLLSDS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00926 215 FunFam Pulmonary surfactant-associated protein B 32 109 - -
Vivi5g00926 215 FunFam Pulmonary surfactant-associated protein B 117 195 - -
Vivi5g00926 215 Pfam Saposin-like type B, region 2 160 193 IPR008138 -
Vivi5g00926 215 ProSiteProfiles Saposin B type domain profile. 117 197 IPR008139 -
Vivi5g00926 215 ProSiteProfiles Saposin B type domain profile. 32 111 IPR008139 -
Vivi5g00926 215 Pfam Saposin-like type B, region 1 121 154 IPR007856 GO:0006629
Vivi5g00926 215 Pfam Saposin-like type B, region 1 34 67 IPR007856 GO:0006629
Vivi5g00926 215 SUPERFAMILY Saposin 34 109 IPR011001 -
Vivi5g00926 215 PANTHER SAPOSIN-RELATED 33 200 - -
Vivi5g00926 215 SMART sapb_4 34 107 IPR008139 -
Vivi5g00926 215 SMART sapb_4 119 193 IPR008139 -
Vivi5g00926 215 Gene3D - 117 196 - -
Vivi5g00926 215 SUPERFAMILY Saposin 119 195 IPR011001 -
Vivi5g00926 215 Gene3D - 32 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00926 Vivi-Chr5 19995842 19999069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00926 K12382 - gmx:100527899 278.87