Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00873 ATGATGAAGAGGTTGTTGGGTGGACCTGGAACAGTGAGTGGATTCTTGTTGCGGTTTGGACAATGTGCATTTGGTGCTGCTTCCATTACCGTCATGGTTACTTCTTTTGGCTTCTCTACCTACACTGCTTTTTGCTATTTAACCGCATCAATGGGACTTCAGGTGCTCTGGAGCTTTGGACTTGCATGTCTTGATATTTATGCCTTGAGAAAAAAGAGAGACTTACAAAATCCAATTCTTGTTAGCTTGTTTGTCGTAGGCGATTGGGTAACAGCCATTTTGTCACTAGCAGCTGCATGCTCATCAGCAGGAGTCATAGTTTTATACACAAAAGACGTGGATATGTGCGTGACTCATAAGATAATCCCTTGCCACAGGTACCAGGTTTCTATAGCCATGGCTTTCGTCACCTGGTTTCTTACTGCAATATCATCACATGTGATGTTTTGGATATTGGCCTCAGTCTAG 468 0.4316 MMKRLLGGPGTVSGFLLRFGQCAFGAASITVMVTSFGFSTYTAFCYLTASMGLQVLWSFGLACLDIYALRKKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVIVLYTKDVDMCVTHKIIPCHRYQVSIAMAFVTWFLTAISSHVMFWILASV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00873 155 PANTHER CASP-LIKE PROTEIN 5B3 2 155 IPR045009 -
Vivi5g00873 155 Pfam Casparian strip membrane protein domain 9 140 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00873 Vivi-Chr5 16729894 16734139 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00873 - - gmx:100306188 271.937