Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00842 ATGTCGTTTTACATTGGTCGAGAGGCTTCTAAGTTATGGAAGAGAATTTGCTCAGAGACAACTGTTGAGATCAACCTTCTTGCTGAGAATTGGAAGTATCTTCTAGTTGGCCTTGTTTGTCAGTACATACATGGTTTGGCGGCCCGAGGAGTTCATTATTTTCATAAGCCCGGCCCTATTCTGCAAGATGTTGGATTCTTCCTTCTTCCGGAGCTCGGACAAGACAAAGCTTACATCAGCGAAACACTGTTCACCACAATCTTTATATCCTTTGCCTTGTGGACGTTCCATCCTTTCATATTGAAAAGCCGAAAGATTTACACCGTTCTTATATGGTGCCGAGTTCTAGCATTCTTATTCGCTTCTCAAATTCTTCGCATAATTACATTTTATTCTACACAACTTCCCGGTCCAAACTACCACTGCCGTGAGGGTTCTAAACTCGCCACATTGCCCCGTCCAGATAACATTCTCGAAGTACTCGTGATCAACTTTCCGCATGGCGTGCTATATGGATGCGGTGATTTAATATTTTCGTCACACATGATCTTTACTCTTACTTTTGTGCGCACATATCAGAAATATGGAACCAGAAGATCCATAAAGCAGCTCGCGTGGCTGCTTGCCGTGATTCAGAGTCTTTTGATAGTAGCATCTCGCAAACATTATACGGTTGATGTAGTTGTTGCCTGGTACACTGTAAATTTGGTGGTATTTTTTGTTGACAAGAAATTGCCAGAATTGCCGGACCGGTCGATTGCAGCTTCAGCGGCCCTGCTGCCATTAAGCAACAAAGACAAAGACAAAGACGGTAGGAACAAAGAGGAGAACTACAAGCTATTGAATGGAAATTCCGGTGACCCTGCGGATCGAAGACAAAGATCTCAAATAAACGGCAAGATCACTGATGACGGAAATACACACCATACCGACTCTTCCATGAACAGTGCATAG 954 0.434 MSFYIGREASKLWKRICSETTVEINLLAENWKYLLVGLVCQYIHGLAARGVHYFHKPGPILQDVGFFLLPELGQDKAYISETLFTTIFISFALWTFHPFILKSRKIYTVLIWCRVLAFLFASQILRIITFYSTQLPGPNYHCREGSKLATLPRPDNILEVLVINFPHGVLYGCGDLIFSSHMIFTLTFVRTYQKYGTRRSIKQLAWLLAVIQSLLIVASRKHYTVDVVVAWYTVNLVVFFVDKKLPELPDRSIAASAALLPLSNKDKDKDGRNKEENYKLLNGNSGDPADRRQRSQINGKITDDGNTHHTDSSMNSA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00842 317 MobiDBLite consensus disorder prediction 264 317 - -
Vivi5g00842 317 Pfam PAP2 superfamily C-terminal 172 240 IPR025749 -
Vivi5g00842 317 PANTHER SPHINGOMYELIN SYNTHETASE 9 252 IPR045221 GO:0016780
Vivi5g00842 317 MobiDBLite consensus disorder prediction 299 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00842 Vivi-Chr5 16112460 16115818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00842 - K22697 gmx:100815011 560.836